RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 TRIP4Q15650 581 aaPredicted RBP22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 MFSD4BQ5TF39 518 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 KIAA2013Q8IYS2 634 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 HEXDCQ8WVB3 486 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 APOL4Q9BPW4 351 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 MYH8P13535 1937 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 SNTNA6NMZ2 147 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 CRHR2Q13324 411 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 XKR6Q5GH73 641 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 DCAKDQ8WVC6 231 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 CADM1Q9BY67 442 aaKnown RBP22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 MAGEH1Q9H213 219 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 ZFP37Q9Y6Q3 630 aaPredicted RBP22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 LINC00854A0A1B0GVQ3 168 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 C9JVG2 144 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 SLC25A14O95258 325 aaPredicted RBP22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 DNAJC28Q9NX36 388 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 CNTN3Q9P232 1028 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 CDH22Q9UJ99 828 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 AP3M1Q9Y2T2 418 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 AP4B1Q9Y6B7 739 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 MYH11P35749 1972 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 H3BN98 237 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 KRT8P05787 483 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 CRATP43155 626 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 RPS7P62081 194 aaKnown RBP22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 INCA1Q0VD86 236 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 BNIP2Q12982 314 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 PRSS55Q6UWB4 352 aaPredicted RBP22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 ZNF317Q96PQ6 595 aaPredicted RBP22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 CCDC3Q9BQI4 270 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 EBF4Q9BQW3 602 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 FAM192AQ9GZU8 254 aa22.4■■□□□ 1.18
CTDSPL-206ENST00000443503 PHRF1Q9P1Y6 1649 aaKnown RBP22.39■■□□□ 1.18
CTDSPL-206ENST00000443503 NDST2P52849 883 aa22.39■■□□□ 1.18
CTDSPL-206ENST00000443503 TCEA2Q15560 299 aa22.39■■□□□ 1.18
CTDSPL-206ENST00000443503 LSM12Q3MHD2 195 aaKnown RBP22.39■■□□□ 1.18
CTDSPL-206ENST00000443503 CTU1Q7Z7A3 348 aaKnown RBP22.39■■□□□ 1.18
CTDSPL-206ENST00000443503 TADA1Q96BN2 335 aa22.39■■□□□ 1.18
CTDSPL-206ENST00000443503 GEMIN8Q9NWZ8 242 aaKnown RBP22.39■■□□□ 1.18
CTDSPL-206ENST00000443503 PSMD13Q9UNM6 376 aa22.39■■□□□ 1.18
CTDSPL-206ENST00000443503 ITM2BQ9Y287 266 aa22.39■■□□□ 1.18
CTDSPL-206ENST00000443503 H0YGN5 161 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 OSTM1Q86WC4 334 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 C10orf53Q8N6V4 93 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 PPP1R16AQ96I34 528 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 HBEGFQ99075 208 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 CLIC5Q9NZA1 410 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 POLR3HQ9Y535 204 aaPredicted RBP22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 NFS1Q9Y697 457 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 NEDD8-MDP1E9PL57 170 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 FTH1P02794 183 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 SWT1Q5T5J6 900 aaKnown RBP22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 LYPLAL1Q5VWZ2 237 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 MAGEC3Q8TD91 643 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 CCDC28BQ9BUN5 200 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 KCNE2Q9Y6J6 123 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 LTBP3Q9NS15 1303 aa22.39■■□□□ 1.17
CTDSPL-206ENST00000443503 ARHGEF9O43307 516 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 EOMESO95936 686 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 GLUD1P00367 558 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 F2P00734 622 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 POLD2P49005 469 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 TNK2Q07912 1038 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 KCNJ11Q14654 390 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 KHDC1Q4VXA5 237 aaKnown RBP22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 TERB1Q8NA31 727 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 PHF21AQ96BD5 680 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 FUBP3Q96I24 572 aaKnown RBP eCLIP22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 TSSK3Q96PN8 268 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 DGCR6LQ9BY27 220 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 TMEM245Q9H330 911 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 VPS51Q9UID3 782 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 GOT2P00505 430 aaKnown RBP22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 F7P08709 466 aaPredicted RBP22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 HNF4AP41235 474 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 ZNF549Q6P9A3 640 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 C10orf82Q8WW14 230 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 PAIP1Q9H074 479 aaKnown RBP22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 BRD9Q9H8M2 597 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 S100A14Q9HCY8 104 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 TPRKBQ9Y3C4 175 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 SLC28A1O00337 649 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 IMPDH2P12268 514 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 MAPKAPK2P49137 400 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 NRG1Q02297 640 aaPredicted RBP22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 CREMQ03060 361 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 IL10RBQ08334 325 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 CCDC142Q17RM4 750 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 ARHGAP36Q6ZRI8 547 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 TSPAN14Q8NG11 270 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 PPM1MQ96MI6 270 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 OR52E6Q96RD3 313 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 PEBP4Q96S96 227 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 ARIH1Q9Y4X5 557 aaPredicted RBP22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 CAPN8A6NHC0 703 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 CA12O43570 354 aa22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 IDH2P48735 452 aaKnown RBP22.38■■□□□ 1.17
CTDSPL-206ENST00000443503 FOLH1Q04609 750 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms