RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 RANBP9Q96S59 729 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RMDN3Q96TC7 470 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 FAM213AQ9BRX8 229 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MYL10Q9BUA6 226 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 C9orf16Q9BUW7 83 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 DGCR6LQ9BY27 220 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 UCK2Q9BZX2 261 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SMOC2Q9H3U7 446 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 C17orf75Q9HAS0 396 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SAYSD1Q9NPB0 183 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ITM2CQ9NQX7 267 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 POLE3Q9NRF9 147 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SETD4Q9NVD3 440 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TMEM9Q9P0T7 183 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MAP10Q9P2G4 905 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MTRRQ9UBK8 725 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SUCOQ9UBS9 1254 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 PSME2Q9UL46 239 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 DIMT1Q9UNQ2 313 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 POMPQ9Y244 141 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ACTL7BQ9Y614 415 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 DOT1LQ8TEK3 1739 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MICAL3Q7RTP6 2002 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ATG2BQ96BY7 2078 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 COL12A1Q99715 3063 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MROH5Q6ZUA9 1318 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 H3BNH8 94 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 M0QZ92 97 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ERVH48-1M5A8F1 160 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 AIM2O14862 343 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 KCNN4O15554 427 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PI15O43692 258 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 HUS1O60921 280 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 NDUFS6O75380 124 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 OAZ2O95190 189 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 KRT18P05783 430 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 SLC9A1P19634 815 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 FGFR2P21802 821 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MATN1P21941 496 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PSMA4P25789 261 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 CDH5P33151 784 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 PIK3CBP42338 1070 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ID4P47928 161 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ALDH3B2P48448 385 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 DGKQP52824 942 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 LSM3P62310 102 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 SH3BP2P78314 561 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CYP4F8P98187 520 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ZNF45Q02386 682 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 KRT17Q04695 432 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 DSC1Q08554 894 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CTTNQ14247 550 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 RAB39AQ14964 217 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 POLD3Q15054 466 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 SSX2Q16385 188 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ARMCX4Q5H9R4 360 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RTP2Q5QGT7 225 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 OGFRL1Q5TC84 451 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 RINT1Q6NUQ1 792 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ERICH5Q6P6B1 374 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CRTC3Q6UUV7 619 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 LAYNQ6UX15 382 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 KCTD8Q6ZWB6 473 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ZNF767PQ75MW2 155 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ARCQ7LC44 396 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CCDC36Q8IYA8 594 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ADGRG5Q8IZF4 528 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RNF148Q8N7C7 305 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 C3orf58Q8NDZ4 430 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ABHD11Q8NFV4 315 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RNASE11Q8TAA1 199 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 GANCQ8TET4 914 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ELMO1Q92556 727 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MTFMTQ96DP5 389 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 PRR11Q96HE9 360 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 HHIPL1Q96JK4 782 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 NACC1Q96RE7 527 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 KCTD14Q9BQ13 255 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 TMEM121Q9BTD3 319 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 GTPBP2Q9BX10 602 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 MIR1-1HGQ9H1L0 117 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 OR51B5Q9H339 312 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RANBP3Q9H6Z4 567 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 ARNT2Q9HBZ2 717 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PRDM9Q9NQV7 894 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TMEM59LQ9UK28 342 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PCOLCE2Q9UKZ9 415 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CACNG2Q9Y698 323 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ARFGEF2Q9Y6D5 1785 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 CACNA1FO60840 1977 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ASPMQ8IZT6 3477 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SALL1Q9NSC2 1324 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SYNJ2BP-COX16A0A087WUM0 186 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 E2F8A0AVK6 867 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ESYT2A0FGR8 921 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 OR6C70A6NIJ9 312 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SAC3D1A6NKF1 404 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 C2orf74A8MZ97 194 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms