RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CRTAMO95727 393 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 CISD3P0C7P0 127 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 PIRTP0C851 137 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 PSMC3P17980 439 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 PPARDQ03181 441 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 RAD51Q06609 339 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 THOC5Q13769 683 aaKnown RBP8.1□□□□□ -1.11
CCDC39-201ENST00000442201 DLG2Q15700 870 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 TEDDM1Q5T9Z0 273 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 CAMK1DQ8IU85 385 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ETFBKMTQ8IXQ9 262 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 C4orf33Q8N1A6 199 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 CPA6Q8N4T0 437 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 GABPB2Q8TAK5 448 aaPredicted RBP8.1□□□□□ -1.11
CCDC39-201ENST00000442201 TRPC4APQ8TEL6 797 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 MZB1Q8WU39 189 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ARHGEF3Q9NR81 526 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 IARS2Q9NSE4 1012 aaKnown RBP8.1□□□□□ -1.11
CCDC39-201ENST00000442201 SLC17A6Q9P2U8 582 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ERVW-1Q9UQF0 538 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 ATG2AQ2TAZ0 1938 aa8.1□□□□□ -1.11
CCDC39-201ENST00000442201 MROH6A6NGR9 719 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GOLGA8TH3BQL2 631 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 LDB2O43679 373 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SOCS5O75159 536 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ZNF821O75541 412 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GSRP00390 522 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 PRKCGP05129 697 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 KRT4P19013 534 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 POU3F3P20264 500 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SERPINA4P29622 427 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 LTBRP36941 435 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 RECQLP46063 649 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 DNAJC3Q13217 504 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ADGRE1Q14246 886 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 INAQ16352 499 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GALNTL6Q49A17 601 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GRTP1Q5TC63 336 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 TMEM215Q68D42 235 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 STRA8Q7Z7C7 330 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 MDM1Q8TC05 714 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GIMAP1Q8WWP7 306 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ELSPBP1Q96BH3 223 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ALKBH8Q96BT7 664 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 MYO19Q96H55 970 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 MSLNLQ96KJ4 702 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 NECTIN4Q96NY8 510 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 AGAP2Q99490 1192 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SPATA16Q9BXB7 569 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 POMKQ9H5K3 350 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 HPS4Q9NQG7 708 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 PDP2Q9P2J9 529 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SMG5Q9UPR3 1016 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 PSAT1Q9Y617 370 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 FZD6O60353 706 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SUPT3HO75486 399 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 PGLSO95336 258 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ITGA2BP08514 1039 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 DLDP09622 509 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SPRP35270 261 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GRIA4P48058 902 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ARCN1P48444 511 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 RPL26P61254 145 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 CTAG1AP78358 180 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 PRAMEP78395 509 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 HPCAP84074 193 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 RUNX3Q13761 415 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 BMPR2Q13873 1038 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GRM2Q14416 872 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 MYLK3Q32MK0 819 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 MAP7D1Q3KQU3 841 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 CARD16Q5EG05 197 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 MROH9Q5TGP6 573 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GRAMD4Q6IC98 578 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SLC2A7Q6PXP3 512 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 C12orf40Q86WS4 652 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SLC7A5P1Q8MH63 180 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ENDOVQ8N8Q3 282 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 CALML6Q8TD86 181 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 CATSPER2Q96P56 530 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 KXD1Q9BQD3 176 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 INTS9Q9NV88 658 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 NKIRAS1Q9NYS0 192 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 HACD3Q9P035 362 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 DLGAP2Q9P1A6 1054 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 RIMKLBQ9ULI2 386 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 RPL26L1Q9UNX3 145 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 PRRC2BQ5JSZ5 2229 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 OTOL1A6NHN0 477 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 FAM47DPA6NHR8 397 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 C2orf81A6NN90 581 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SLC7A4O43246 635 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 HNRNPRO43390 633 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 NDUFB5O43674 189 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 POP4O95707 220 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 CHN1P15882 459 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ARNTP27540 789 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GKP32189 559 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 CSE1LP55060 971 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms