RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TRIM23P36406 574 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 CDK3Q00526 305 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 BIRC2Q13490 618 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 PDK1Q15118 436 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 ISXQ2M1V0 245 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 C3orf38Q5JPI3 329 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 KCTD16Q68DU8 428 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 ALG1LQ6GMV1 187 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 SARM1Q6SZW1 724 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 PELI3Q8N2H9 469 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 RNF25Q96BH1 459 aaPredicted RBP19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 AP2M1Q96CW1 435 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 TMEM168Q9H0V1 697 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 DPEP2Q9H4A9 486 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 PCDH9Q9HC56 1237 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 HYOU1Q9Y4L1 999 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 LAMA5O15230 3695 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 CAPN8A6NHC0 703 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 ZNF487B1APH4 448 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 CD86P42081 329 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 MAGEA1P43355 309 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 GNPDA1P46926 289 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 PPIDQ08752 370 aaKnown RBP19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 ILF3Q12906 894 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 SLC10A2Q12908 348 aaPredicted RBP19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 TBX2Q13207 712 aaPredicted RBP19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 PTPRRQ15256 657 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 SPA17Q15506 151 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 TBC1D25Q3MII6 688 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 LRRC38Q5VT99 294 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 FOXR1Q6PIV2 292 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 VSIG1Q86XK7 387 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 LSMEM2Q8N112 164 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 PLD5Q8N7P1 536 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 OR6C4Q8NGE1 309 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 KIAA1524Q8TCG1 905 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 FGF11Q92914 225 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 GSDMCQ9BYG8 508 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 KIF26BQ2KJY2 2108 aa19.82■□□□□ 0.76
SHROOM1-204ENST00000440118 CACNA1GO43497 2377 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 ZFC3H1O60293 1989 aaKnown RBP19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 A0A087WV48 116 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 FZD6O60353 706 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 PYGLP06737 847 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 COMTP21964 271 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 RPL26P61254 145 aaKnown RBP19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 PDZD3Q86UT5 571 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 GRAMD1AQ96CP6 724 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 ATXN7L3BQ96GX2 97 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 GFM1Q96RP9 751 aaKnown RBP19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 TEX101Q9BY14 249 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 ADGRE3Q9BY15 652 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 CEP41Q9BYV8 373 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 POLR1BQ9H9Y6 1135 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 RPL26L1Q9UNX3 145 aaKnown RBP19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 SATB2Q9UPW6 733 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 PPIL1Q9Y3C6 166 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 NBEAQ8NFP9 2946 aa19.81■□□□□ 0.76
SHROOM1-204ENST00000440118 UNC13CQ8NB66 2214 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 COL27A1Q8IZC6 1860 aaPredicted RBP19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 A0A0U1RQS6 177 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 C1orf232A0A0U1RR37 186 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 TLX3O43711 291 aaPredicted RBP19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 IPO7O95373 1038 aaKnown RBP19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 RPLP0P05388 317 aaKnown RBP19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 RBMS1P29558 406 aaKnown RBP19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 CYLC1P35663 651 aaPredicted RBP19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 PCBP4P57723 403 aaKnown RBP19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 IFI35P80217 286 aaPredicted RBP19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 NIPAL4Q0D2K0 466 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 SLC9A4Q6AI14 798 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 SNIP1Q8TAD8 396 aaKnown RBP19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 ARRDC2Q8TBH0 407 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 AGAP3Q96P47 875 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 SMIM14Q96QK8 99 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 CDH19Q9H159 772 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 SUFUQ9UMX1 484 aa19.8■□□□□ 0.76
SHROOM1-204ENST00000440118 PSTPIP1O43586 416 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 SLC4A1P02730 911 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 TEAD1P28347 426 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 EIF2S3P41091 472 aaKnown RBP19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 LSSP48449 732 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 DPTQ07507 201 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 CCDC173Q0VFZ6 552 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 ZBTB17Q13105 803 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 PEX6Q13608 980 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 TFDP2Q14188 446 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 C14orf28Q4W4Y0 310 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 NPNTQ6UXI9 565 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 CCDC50Q8IVM0 306 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 Q8N9G6 341 aaPredicted RBP19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 TC2NQ8N9U0 490 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 CCL4L1Q8NHW4 92 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 CCHCR1Q8TD31 782 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 ZNF578Q96N58 590 aaPredicted RBP19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 FRMD8Q9BZ67 464 aaPredicted RBP19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 ABCG8Q9H221 673 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 THSD1Q9NS62 852 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 PKD2L2Q9NZM6 624 aa19.79■□□□□ 0.76
SHROOM1-204ENST00000440118 C3orf70A6NLC5 250 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms