RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MBL2P11226 248 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 NCF1P14598 390 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 PAX3P23760 479 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 AKAP5P24588 427 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 PIGAP37287 484 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 GSSP48637 474 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 ACADVLP49748 655 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 HLCSP50747 726 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 RPS3AP61247 264 aaKnown RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 RBP5P82980 135 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 NFYCQ13952 458 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 MXD4Q14582 209 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 MAPRE2Q15555 327 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 PAGE3Q5JUK9 113 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 CCNYL2Q5T2Q4 361 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 SAMD7Q7Z3H4 446 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 PIWIL4Q7Z3Z4 852 aaKnown RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 SLC22A17Q8WUG5 538 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 SEPT1Q8WYJ6 367 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 MYRFLQ96LU7 910 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 NSMCE3Q96MG7 304 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 FZD8Q9H461 694 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 ATP13A3Q9H7F0 1226 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 MID1IP1Q9NPA3 183 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 TLR9Q9NR96 1032 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 SLCO3A1Q9UIG8 710 aa13.39□□□□□ -0.27
ACTN1-204ENST00000438964 COL11A1P12107 1806 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-204ENST00000438964 HACD1B0YJ81 288 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 PTPRAP18433 802 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 GPX3P22352 226 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 SH3BP2P78314 561 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 OCA2Q04671 838 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 LIPEQ05469 1076 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 FRG1Q14331 258 aaKnown RBP13.38□□□□□ -0.27
ACTN1-204ENST00000438964 CATSPEREQ5SY80 951 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 INTS11Q5TA45 600 aaKnown RBP13.38□□□□□ -0.27
ACTN1-204ENST00000438964 VASH1Q7L8A9 365 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-204ENST00000438964 FAM86B1Q8N7N1 296 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 TRPV3Q8NET8 790 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 KCTD14Q9BQ13 255 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-204ENST00000438964 TEX13BQ9BXU2 312 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 GBA3Q9H227 469 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 ALG2Q9H553 416 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 MEAF6Q9HAF1 191 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 CYP3A43Q9HB55 503 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 SNTG2Q9NY99 539 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 PTBP2Q9UKA9 531 aaKnown RBP13.38□□□□□ -0.27
ACTN1-204ENST00000438964 NDUFAF1Q9Y375 327 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 PCDHGA8Q9Y5G5 932 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 PCDHGA3Q9Y5H0 932 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 TANC1Q9C0D5 1861 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 SLC22A2O15244 555 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 NADKO95544 446 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-204ENST00000438964 LDLRP01130 860 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 HTR1AP08908 422 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 HGFP14210 728 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 CPB1P15086 417 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 ADSLP30566 484 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-204ENST00000438964 RFC2P35250 354 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 MAP2K4P45985 399 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 CCNA1P78396 465 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 INCA1Q0VD86 236 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 DPY19L1Q2PZI1 675 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 TMTC4Q5T4D3 741 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 NLGN1Q8N2Q7 840 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 REPS2Q8NFH8 660 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 C17orf50Q8WW18 174 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 LRRC58Q96CX6 371 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 MAGED4Q96JG8 741 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 C11orf84Q9BUA3 381 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-204ENST00000438964 DNAI2Q9GZS0 605 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 IGSF5Q9NSI5 407 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 PPP1R1BQ9UD71 204 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-204ENST00000438964 BAG5Q9UL15 447 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 ATP11BQ9Y2G3 1177 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 PCDHB3Q9Y5E6 796 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 DNAJC15Q9Y5T4 150 aa13.38□□□□□ -0.27
ACTN1-204ENST00000438964 ZNF701M0R085 212 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 OR4D2P58180 307 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 CBLBQ13191 982 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 PTPRCAPQ14761 206 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 ZNF773Q6PK81 442 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 ZNF354CQ86Y25 554 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 SPARTQ8N0X7 666 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 SFRP1Q8N474 314 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 ADAMTS16Q8TE57 1224 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 ADAMTS10Q9H324 1103 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 MAP3K20Q9NYL2 800 aaKnown RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 BMP4P12644 408 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 CYP4B1P13584 511 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 NOS2P35228 1153 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 ARL1P40616 181 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 MATKP42679 507 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 BACE1P56817 501 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 MTPNP58546 118 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 NCS1P62166 190 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 MAPRE1Q15691 268 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 277.1 ms