RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 HEMK1Q9Y5R4 338 aaPredicted RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 DGKBQ9Y6T7 804 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 HECTD1Q9ULT8 2610 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 PMS2P1A4D2B8 440 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 RHPN2P1A8MT19 583 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 CDRT15L2A8MXV6 281 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 K7ENP7 123 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 AGRPO00253 132 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 NTN3O00634 580 aaPredicted RBP7.78□□□□□ -1.16
VPS50-204ENST00000438395 TNFRSF10CO14798 259 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 TEX33O43247 280 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 MBD3O95983 291 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 CPP00450 1065 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 CYP2A6P11509 494 aaPredicted RBP7.78□□□□□ -1.16
VPS50-204ENST00000438395 GLB1P16278 677 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 ERCC2P18074 760 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 SLC5A2P31639 672 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 UGT1A5P35504 534 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 SCNN1BP51168 640 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 CCL7P80098 99 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 IL10RBQ08334 325 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 MAMLD1Q13495 774 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 LBRQ14739 615 aaKnown RBP7.78□□□□□ -1.16
VPS50-204ENST00000438395 TLR1Q15399 786 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 C14orf28Q4W4Y0 310 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 CERCAMQ5T4B2 595 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 ERMARDQ5T6L9 678 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 KIAA1614Q5VZ46 1190 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 DENND2CQ68D51 928 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 INO80CQ6PI98 192 aaPredicted RBP7.78□□□□□ -1.16
VPS50-204ENST00000438395 TMCO3Q6UWJ1 677 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 USP53Q70EK8 1073 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 USP45Q70EL2 814 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 DPPA4Q7L190 304 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 B3GNT8Q7Z7M8 397 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 PSTKQ8IV42 348 aaKnown RBP7.78□□□□□ -1.16
VPS50-204ENST00000438395 ATPAF2Q8N5M1 289 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 LZTR1Q8N653 840 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 AOPEPQ8N6M6 819 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 CCDC112Q8NEF3 446 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 OR1E3Q8WZA6 343 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 TMEM159Q96B96 161 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 ZNF653Q96CK0 615 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 NUS1Q96E22 293 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 MED8Q96G25 268 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 ZNF599Q96NL3 588 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 SNRNP25Q9BV90 132 aaKnown RBP7.78□□□□□ -1.16
VPS50-204ENST00000438395 GSDMCQ9BYG8 508 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 SLC39A8Q9C0K1 460 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 RUBCNLQ9H714 662 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 CARS2Q9HA77 564 aaKnown RBP7.78□□□□□ -1.16
VPS50-204ENST00000438395 FGF22Q9HCT0 170 aa7.78□□□□□ -1.16
VPS50-204ENST00000438395 MRPL47Q9HD33 250 aaKnown RBP7.78□□□□□ -1.16
VPS50-204ENST00000438395 PNMA8BQ9ULN7 279 aaPredicted RBP7.78□□□□□ -1.16
VPS50-204ENST00000438395 TDRD6O60522 2096 aaKnown RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 A0A1W2PNU3 283 aaPredicted RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 TCRBV5S1A1TA0A578 114 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 PRSS38A1L453 326 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 A8MX80 341 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 NUDT21O43809 227 aaKnown RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 BUB1BO60566 1050 aaPredicted RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 SOCS5O75159 536 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 MYBL1P10243 752 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 LIPCP11150 499 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 MYCLP1P12525 358 aaPredicted RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 ATP1A3P13637 1013 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 HGFP14210 728 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 MIPP30301 263 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 CCKBRP32239 447 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 VIPR1P32241 457 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 SERPINB6P35237 376 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 NOP2P46087 812 aaKnown RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 RGRP47804 291 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 PDX1P52945 283 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 GDF10P55107 478 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 OGDHQ02218 1023 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 NSUN2Q08J23 767 aaKnown RBP eCLIP7.77□□□□□ -1.17
VPS50-204ENST00000438395 KLHL30Q0D2K2 578 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 LY6DQ14210 128 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 AMZ1Q400G9 498 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 TDRD12Q587J7 1177 aaKnown RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 MANEAQ5SRI9 462 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 CCDC183Q5T5S1 534 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 SPECC1LQ69YQ0 1117 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 RAET1GQ6H3X3 334 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 PLEKHA7Q6IQ23 1121 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 LIPIQ6XZB0 460 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 SPRED1Q7Z699 444 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 NDUFAF2Q8N183 169 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 PLA2G15Q8NCC3 412 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 GPR156Q8NFN8 814 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 FNIP1Q8TF40 1166 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 SNRNP27Q8WVK2 155 aaKnown RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 FUBP1Q96AE4 644 aaKnown RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 PRR11Q96HE9 360 aaPredicted RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 PSKH2Q96QS6 385 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 CDH19Q9H159 772 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 LMBRD1Q9NUN5 540 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 LRIT1Q9P2V4 623 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms