RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 A0A0G2JLL6 359 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 RPP40O75818 363 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 CST1P01037 141 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 LPOP22079 712 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 LCP2Q13094 533 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 MAPK11Q15759 364 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 TRIM60Q495X7 471 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 PRRT2Q7Z6L0 340 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ADAMTSL2Q86TH1 951 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM126BQ8IUX1 230 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 CCDC103Q8IW40 242 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 HM13Q8TCT9 377 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 STYXQ8WUJ0 223 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 CANT1Q8WVQ1 401 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 KCTD13Q8WZ19 329 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 TOP1MTQ969P6 601 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 PPM1MQ96MI6 270 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 SLC39A8Q9C0K1 460 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ALG2Q9H553 416 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 SH3BP1Q9Y3L3 701 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 IGKV6-21A0A0C4DH24 114 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 AQP12BA6NM10 295 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 A8MT66 165 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 PIP5K1BO14986 540 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ULK1O75385 1050 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 MT-ND1P03886 318 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ALDH2P05091 517 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 UMPSP11172 480 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 RHOQP17081 205 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 DNAJB1P25685 340 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 PIK3CGP48736 1102 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 CLCNKBP51801 687 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 RPL38P63173 70 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 CLCQ05315 142 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 NIPAL4Q0D2K0 466 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 GALNT2Q10471 571 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ELAVL2Q12926 359 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 DGCR6Q14129 220 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 RETSATQ6NUM9 610 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 GCNT7Q6ZNI0 430 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ARHGAP36Q6ZRI8 547 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 RRM2BQ7LG56 351 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ZNF554Q86TJ5 538 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 TRIM69Q86WT6 500 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 AQP12AQ8IXF9 295 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ELMOD1Q8N336 334 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 RTL3Q8N8U3 475 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 GATA6Q92908 595 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 LINGO1Q96FE5 620 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 UROC1Q96N76 676 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 OSBPL6Q9BZF3 934 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ZFP14Q9HCL3 533 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 GDAP2Q9NXN4 497 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ECM29Q5VYK3 1845 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 A0A1W2PQH9 124 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 CAPN14A8MX76 684 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 UBXN8O00124 270 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 FFAR3O14843 346 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 GPR42O15529 346 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 CNOT3O75175 753 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 WDR47O94967 919 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 OTCP00480 354 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 MBL2P11226 248 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 SMPD1P17405 629 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 DDX5P17844 614 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 PROZP22891 400 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 POLR2JP52435 117 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 SLC5A3P53794 718 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 TUSC3Q13454 348 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 KRR1Q13601 381 aaKnown RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 DDR2Q16832 855 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 OR2T12Q8NG77 320 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 RNF217Q8TC41 542 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 SH3KBP1Q96B97 665 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 EXOC2Q96KP1 924 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 FCRL3Q96P31 734 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-205ENST00000438362 ACBD6Q9BR61 282 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 TEX12Q9BXU0 123 aa6.68□□□□□ -1.34
CSDE1-205ENST00000438362 SCN7AQ01118 1682 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 MGAT4DA6NG13 374 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 H3BSA7 217 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 NFKBIEO00221 500 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 NRP1O14786 923 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 RGS5O15539 181 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ZBTB14O43829 449 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 DNAJA2O60884 412 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ALDH1A2O94788 518 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 OR6B1O95007 311 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 MYCP01106 439 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 EDN1P05305 212 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 PKMP14618 531 aaKnown RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 IMPDH1P20839 514 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 DGKAP23743 735 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 EDNRBP24530 442 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 SOAT1P35610 550 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ATP5C1P36542 298 aaKnown RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 MAGEA6P43360 314 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 CCR10P46092 362 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ARHGEF6Q15052 776 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ARMC12Q5T9G4 340 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms