RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 VPS26BQ4G0F5 336 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 DHFR2Q86XF0 187 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 MYO1HQ8N1T3 1032 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 SOCS4Q8WXH5 440 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 FATE1Q969F0 183 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 TADA1Q96BN2 335 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 MYEOVQ96EZ4 313 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 ZNF597Q96LX8 424 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 RPRD1AQ96P16 312 aaPredicted RBP11.8□□□□□ -0.52
CD44-209ENST00000433892 PLK2Q9NYY3 685 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 CNOT6Q9ULM6 557 aaKnown RBP11.8□□□□□ -0.52
CD44-209ENST00000433892 RNF11Q9Y3C5 154 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 DOCK4Q8N1I0 1966 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 IGLV3-10A0A075B6K4 115 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 PIP5K1BO14986 540 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 PENKP01210 267 aaPredicted RBP11.8□□□□□ -0.52
CD44-209ENST00000433892 CKMT2P17540 419 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 CTGFP29279 349 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 OR1E1P30953 314 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 HUNKP57058 714 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 APOFQ13790 326 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 MAP7D1Q3KQU3 841 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 FBXO48Q5FWF7 155 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 HMBOX1Q6NT76 420 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 CHERPQ8IWX8 916 aaKnown RBP11.8□□□□□ -0.52
CD44-209ENST00000433892 DDIASQ8IXT1 998 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 ATAD1Q8NBU5 361 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 KLHDC9Q8NEP7 349 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 TWIST2Q8WVJ9 160 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 CANT1Q8WVQ1 401 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 PBXIP1Q96AQ6 731 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 BTN2A3PQ96KV6 586 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 RBM38Q9H0Z9 239 aaKnown RBP11.8□□□□□ -0.52
CD44-209ENST00000433892 FBXO44Q9H4M3 255 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 MAP10Q9P2G4 905 aa11.8□□□□□ -0.52
CD44-209ENST00000433892 PRG3Q9Y2Y8 225 aaPredicted RBP11.8□□□□□ -0.52
CD44-209ENST00000433892 ASGR1P07306 291 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 MTHFD2P13995 350 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 GFAPP14136 432 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 ZNF37AP17032 561 aaPredicted RBP11.79□□□□□ -0.52
CD44-209ENST00000433892 OR1G1P47890 313 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 ATP4BP51164 291 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 YBX1P67809 324 aaKnown RBP11.79□□□□□ -0.52
CD44-209ENST00000433892 SERINC3Q13530 473 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 MAP7Q14244 749 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 MRNIPQ6NTE8 343 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 HACD2Q6Y1H2 254 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 ZNF598Q86UK7 904 aaKnown RBP11.79□□□□□ -0.52
CD44-209ENST00000433892 DCP1BQ8IZD4 617 aaKnown RBP11.79□□□□□ -0.52
CD44-209ENST00000433892 ATP6V0D2Q8N8Y2 350 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 PCYOX1LQ8NBM8 494 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 RIN3Q8TB24 985 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 TRPC4APQ8TEL6 797 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 SLC45A3Q96JT2 553 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 POLR1EQ9GZS1 481 aaKnown RBP11.79□□□□□ -0.52
CD44-209ENST00000433892 SPC25Q9HBM1 224 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 BTRCQ9Y297 605 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 A0A1B0GTL3 188 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 NME4O00746 187 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 AZIN1O14977 448 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 AKAP10O43572 662 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 OAZ2O95190 189 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 LINC00032P0C843 101 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 HSPA8P11142 646 aaKnown RBP11.79□□□□□ -0.52
CD44-209ENST00000433892 CHRM3P20309 590 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 CAPN3P20807 821 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 ATP6V1B2P21281 511 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 PAX3P23760 479 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 PBX3P40426 434 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 ACVR1Q04771 509 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 IL10RBQ08334 325 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 CAPRIN1Q14444 709 aaKnown RBP11.79□□□□□ -0.52
CD44-209ENST00000433892 USP41Q3LFD5 358 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 C10orf120Q5SQS8 335 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 B3GNT6Q6ZMB0 384 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 RAB44Q7Z6P3 723 aaPredicted RBP11.79□□□□□ -0.52
CD44-209ENST00000433892 OR4L1Q8NH43 312 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 ROPN1LQ96C74 230 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 TUBGCP3Q96CW5 907 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 TMEM79Q9BSE2 394 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 EFHD1Q9BUP0 239 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 OSBPL11Q9BXB4 747 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 TUBB1Q9H4B7 451 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 CATSPERZQ9NTU4 200 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 TRMT13Q9NUP7 481 aaKnown RBP11.79□□□□□ -0.52
CD44-209ENST00000433892 PTTG2Q9NZH5 202 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 MARCH2Q9P0N8 246 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 EGFL7Q9UHF1 273 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 ACTL7AQ9Y615 435 aa11.79□□□□□ -0.52
CD44-209ENST00000433892 SLC12A8A0AV02 714 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 UBA6A0AVT1 1052 aaPredicted RBP11.78□□□□□ -0.52
CD44-209ENST00000433892 H0YJX3 145 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 RPP40O75818 363 aaKnown RBP11.78□□□□□ -0.52
CD44-209ENST00000433892 STAMBPO95630 424 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 FGF4P08620 206 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 CYBAP13498 195 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 ARPP19P56211 112 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 ZNF235Q14590 738 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 CST9Q5W186 159 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms