RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LARP4Q71RC2 724 aaKnown RBP eCLIP11.55□□□□□ -0.562e-79■■□□□ 13.9
HMGCS1-202ENST00000433297 THAP5Q7Z6K1 395 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 LDB1Q86U70 411 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 NDNFQ8TB73 568 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 DACH2Q96NX9 599 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 KCNA7Q96RP8 456 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 INTS10Q9NVR2 710 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 SLAMF8Q9P0V8 285 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 FARP2O94887 1054 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 PARNO95453 639 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 CHEK2O96017 543 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC4A1P02730 911 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 GPIP06744 558 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 HGFP14210 728 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 KPNA2P52292 529 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 IL1RL1Q01638 556 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 ADIGQ0VDE8 80 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 SYPL2Q5VXT5 272 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 GTF2IRD2BQ6EKJ0 949 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 LCN8Q6JVE9 175 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 SCIMPQ6UWF3 145 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 VASH1Q7L8A9 365 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 LINC00523Q86TU6 105 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 GTF2IRD2Q86UP8 949 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 HEATR4Q86WZ0 1026 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 CENPIQ92674 756 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 BIRC7Q96CA5 298 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 DHRS1Q96LJ7 313 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 MID1IP1Q9NPA3 183 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 ITM2CQ9NQX7 267 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 NSMCE4AQ9NXX6 385 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 ANKMY1Q9P2S6 941 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 SUN2Q9UH99 717 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 PCDHB3Q9Y5E6 796 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 PCDHGA8Q9Y5G5 932 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 LRRC14BA6NHZ5 514 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 ZNF487B1APH4 448 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 GNGT2O14610 69 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 MSI1O43347 362 aaKnown RBP11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 PMPCBO75439 489 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 CPB1P15086 417 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 FSHRP23945 695 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 CRHBPP24387 322 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 MATKP42679 507 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 LEPRP48357 1165 aaKnown RBP11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 NDUFV1P49821 464 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 AGAP9Q5VTM2 703 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 AGAP7PQ5VUJ5 663 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 ANKRD34AQ69YU3 496 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 NAPEPLDQ6IQ20 393 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 PLEKHG7Q6ZR37 379 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 PDZD4Q76G19 769 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 PAGE2Q7Z2X7 111 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 TBC1D21Q8IYX1 336 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 HS3ST5Q8IZT8 346 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 DNERQ8NFT8 737 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC2A14Q8TDB8 520 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 CTRCQ99895 268 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 FDXACB1Q9BRP7 624 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 CEP44Q9C0F1 390 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 FZD8Q9H461 694 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 HPS4Q9NQG7 708 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 PDE10AQ9Y233 779 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 NME7Q9Y5B8 376 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 ARID2Q68CP9 1835 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 H0Y858 1186 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 PIP5K1BO14986 540 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 SIX3O95343 332 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 THRBP10828 461 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 TCF3P15923 654 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 LMO2P25791 158 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 NOS2P35228 1153 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 ARSFP54793 590 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 DIO3P55073 304 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 UGT3A2Q3SY77 523 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 ATAD3BQ5T9A4 648 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 TAS2R42Q7RTR8 314 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 AKAP14Q86UN6 197 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 LGI2Q8N0V4 545 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 SCML4Q8N228 414 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 NPWQ8N729 165 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 OR52K2Q8NGK3 314 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC22A17Q8WUG5 538 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 TMBIM1Q969X1 311 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 MAGED4Q96JG8 741 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 YTHDF1Q9BYJ9 559 aaKnown RBP11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 TOR3AQ9H497 397 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 MRGBPQ9NV56 204 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 GDAP2Q9NXN4 497 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 TNFSF13BQ9Y275 285 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 TRIM64BA6NI03 449 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 CRCPO75575 148 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 BMP4P12644 408 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 TGM1P22735 817 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 FOXA1P55317 472 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 TUBA3CQ13748 450 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 PSMD5Q16401 504 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 PKDCCQ504Y2 493 aa11.54□□□□□ -0.56
HMGCS1-202ENST00000433297 UGT3A1Q6NUS8 523 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms