RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SMAD5Q99717 465 aaKnown RBP17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 CCDC167Q9P0B6 97 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 VTI1BQ9UEU0 232 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 PCDHB1Q9Y5F3 818 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 SPEF2Q9C093 1822 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 GRXCR1A8MXD5 290 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 KLF8O95600 359 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 UMPSP11172 480 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 ATP5F1P24539 256 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 LRPAP1P30533 357 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 ESRP1Q6NXG1 681 aaKnown RBP17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 RIPOR1Q6ZS17 1223 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 SERPINA9Q86WD7 417 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 ST13P4Q8IZP2 240 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 MCCC1Q96RQ3 725 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 ALKBH2Q6NS38 261 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 KYAT3Q6YP21 454 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 P3H2Q8IVL5 708 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 FAM46DQ8NEK8 389 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 KCTD13Q8WZ19 329 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 ATG10Q9H0Y0 220 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 NDUFAF1Q9Y375 327 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 ILVBLA1L0T0 632 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 WNT9AO14904 365 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 MAGEA11P43364 429 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 BLVRAP53004 296 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 FASTKQ14296 549 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 ZBTB2Q8N680 514 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 METTL21AQ8WXB1 218 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 FIG4Q92562 907 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 NHSL1Q5SYE7 1610 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 ACP5P13686 325 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 PHF21AQ96BD5 680 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 TTC24A2A3L6 582 aaPredicted RBP17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 MLYCDO95822 493 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 ACVRL1P37023 503 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 FAM129CQ86XR2 697 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 IFNLR1Q8IU57 520 aaPredicted RBP17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 C12orf66Q96MD2 445 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 ATAD3AQ9NVI7 634 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 XPR1Q9UBH6 696 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 HS3ST4Q9Y661 456 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 NPEPPSL1A6NEC2 478 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 TGM5O43548 720 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 CNPP09543 421 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 NAE1Q13564 534 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 SEMA5AQ13591 1074 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 TRIP10Q15642 601 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 LRRC8BQ6P9F7 803 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 CMC1Q7Z7K0 106 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 AGGF1Q8N302 714 aaeCLIP17.07■□□□□ 0.324e-6■■■■□ 20.3
SMARCA4-203ENST00000429416 PCDH19Q8TAB3 1148 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 CAVIN3Q969G5 261 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 BTRCQ9Y297 605 aa17.07■□□□□ 0.32
SMARCA4-203ENST00000429416 ITGAXP20702 1163 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 TMEM110Q86TL2 294 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 MTDHQ86UE4 582 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 STARD8Q92502 1023 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 TPD52L3Q96J77 140 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 ADAM7Q9H2U9 754 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 SRMSQ9H3Y6 488 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 KRT84Q9NSB2 600 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 EFR3BQ9Y2G0 817 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 GJB5O95377 273 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 VIPR2P41587 438 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 SMARCD2Q92925 531 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 GPR21Q99679 349 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 AARSD1Q9BTE6 412 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 TTLL2Q9BWV7 592 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 ANKZF1Q9H8Y5 726 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 NUP188Q5SRE5 1749 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 COCHO43405 550 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 AP2A1O95782 977 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 OTCP00480 354 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 RPIAP49247 311 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 HNRNPH2P55795 449 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 COPZ1P61923 177 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 RASA2Q15283 850 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 CHSY3Q70JA7 882 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 VN1R5Q7Z5H4 357 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 OR2AP1Q8NGE2 309 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 ZFP28Q8NHY6 868 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 AIF1LQ9BQI0 150 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 R3HDMLQ9H3Y0 253 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 CLK3P49761 638 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 WDR45BQ5MNZ6 344 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 SLC30A9Q6PML9 568 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 GPRIN3Q6ZVF9 776 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 APTXQ7Z2E3 356 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 SDCBP2Q9H190 292 aa17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 PPIEQ9UNP9 301 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 TRPM3Q9HCF6 1732 aaPredicted RBP17.06■□□□□ 0.32
SMARCA4-203ENST00000429416 BCLAF3A2AJT9 711 aaKnown RBP17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 IMPDH2P12268 514 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 NOS3P29474 1203 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 IRAK1P51617 712 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 VAC14Q08AM6 782 aa17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 BNC2Q6ZN30 1099 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-203ENST00000429416 KCTD14Q9BQ13 255 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms