RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 DEFB115Q30KQ5 88 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 PPP1R26Q5T8A7 1209 aaPredicted RBP12.79□□□□□ -0.36
LDB3-205ENST00000429277 FAM171BQ6P995 826 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 CNSTQ6PJW8 725 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TRABD2AQ86V40 505 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 HIPK1Q86Z02 1210 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 TMPRSS4Q9NRS4 437 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 RAPGEFL1Q9UHV5 662 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 HES2Q9Y543 173 aa12.79□□□□□ -0.36
LDB3-205ENST00000429277 YDJCA8MPS7 323 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 PGK1P00558 417 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 CHRNGP07510 517 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 PKMP14618 531 aaKnown RBP12.78□□□□□ -0.36
LDB3-205ENST00000429277 CPSF6Q16630 551 aaKnown RBP eCLIP12.78□□□□□ -0.36
LDB3-205ENST00000429277 BEND5Q7L4P6 421 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 LGMNQ99538 433 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 RHOBTB2Q9BYZ6 727 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 PXDNQ92626 1479 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 PREX1Q8TCU6 1659 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 SLC28A2O43868 658 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 FARP2O94887 1054 aaPredicted RBP12.78□□□□□ -0.36
LDB3-205ENST00000429277 NDST3O95803 873 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 PRNPP04156 253 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
LDB3-205ENST00000429277 CRHR1P34998 444 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 SSR2P43308 183 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 GNPDA1P46926 289 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 ATP13A4Q4VNC1 1196 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 METTL21CQ5VZV1 264 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 TATDN1Q6P1N9 297 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 ARHGAP22Q7Z5H3 698 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 GPR156Q8NFN8 814 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 OR4A15Q8NGL6 344 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 STYXQ8WUJ0 223 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 ELMO3Q96BJ8 720 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 CHST10O43529 356 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 CXCL14O95715 111 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 BPGMP07738 259 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 GABRR2P28476 465 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 PTPN9P43378 593 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 ABCG1P45844 678 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 TRPV3Q8NET8 790 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 ZNF483Q8TF39 744 aaPredicted RBP12.78□□□□□ -0.36
LDB3-205ENST00000429277 RASSF5Q8WWW0 418 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 AP2M1Q96CW1 435 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 SLC47A1Q96FL8 570 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 BCL2L14Q9BZR8 327 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 CLK4Q9HAZ1 481 aaKnown RBP12.78□□□□□ -0.36
LDB3-205ENST00000429277 PLGRKTQ9HBL7 147 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 NUDT4Q9NZJ9 180 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 PHF11Q9UIL8 331 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 CNTNAP1P78357 1384 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 PGRMC2O15173 223 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 BUD23O43709 281 aaKnown RBP12.78□□□□□ -0.36
LDB3-205ENST00000429277 IPO13O94829 963 aaKnown RBP12.78□□□□□ -0.36
LDB3-205ENST00000429277 SERPINA1P01009 418 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 MMP8P22894 467 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 MANFP55145 182 aaKnown RBP12.78□□□□□ -0.36
LDB3-205ENST00000429277 CUZD1Q86UP6 607 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 OR10H5Q8NGA6 315 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 ST6GALNAC4Q9H4F1 302 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 DEC1Q9P2X7 70 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 BTRCQ9Y297 605 aa12.78□□□□□ -0.36
LDB3-205ENST00000429277 GLYATL1P3A0A0U1RQE8 302 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 TAF4O00268 1085 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 MAGEB3O15480 346 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 EDF1O60869 148 aaKnown RBP12.77□□□□□ -0.36
LDB3-205ENST00000429277 UGT2B17O75795 530 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 SHBGP04278 402 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 ITGB5P18084 799 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 ARF4P18085 180 aaPredicted RBP12.77□□□□□ -0.36
LDB3-205ENST00000429277 IDSP22304 550 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 ACADLP28330 430 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 BUD31P41223 144 aaPredicted RBP12.77□□□□□ -0.36
LDB3-205ENST00000429277 TAS2R41P59536 307 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 CACNG1Q06432 222 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 TARBP2Q15633 366 aaKnown RBP12.77□□□□□ -0.36
LDB3-205ENST00000429277 SLC24A5Q71RS6 500 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 IRF2BP2Q7Z5L9 587 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 CDH24Q86UP0 819 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 OR2T12Q8NG77 320 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 OR52K2Q8NGK3 314 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 SLC22A17Q8WUG5 538 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 RIT1Q92963 219 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 PLK4O00444 970 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 PRKAR1AP10644 381 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 CCNCP24863 283 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 IGFALSP35858 605 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 SPAM1P38567 509 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 PTP4A2Q12974 167 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 DENND5AQ6IQ26 1287 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.77□□□□□ -0.36
LDB3-205ENST00000429277 RCN3Q96D15 328 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 COX4I2Q96KJ9 171 aa12.77□□□□□ -0.36
LDB3-205ENST00000429277 COQ7Q99807 217 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms