RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 IL1R2P27930 398 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 VIPR1P32241 457 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 CDK3Q00526 305 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 CTBSQ01459 385 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 TRAF2Q12933 501 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 DPYSQ14117 519 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 NCAPHQ15003 741 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 SMTNL2Q2TAL5 461 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 ZNF761Q86XN6 746 aaPredicted RBP16.53■□□□□ 0.24
VARS-216ENST00000428445 NAGSQ8N159 534 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 CBARPQ8N350 705 aaPredicted RBP16.53■□□□□ 0.24
VARS-216ENST00000428445 KIAA1524Q8TCG1 905 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 PSKH2Q96QS6 385 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 TEX101Q9BY14 249 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 FRMD8Q9BZ67 464 aaPredicted RBP16.53■□□□□ 0.24
VARS-216ENST00000428445 PHPT1Q9NRX4 125 aaPredicted RBP16.53■□□□□ 0.24
VARS-216ENST00000428445 ANO10Q9NW15 660 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 SEPT3Q9UH03 358 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 PCDHB11Q9Y5F2 797 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 A0A1W2PQC6 194 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 HTRA2O43464 458 aaPredicted RBP16.52■□□□□ 0.24
VARS-216ENST00000428445 PRPSAP2O60256 369 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 RNF8O76064 485 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 CPP00450 1065 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 FTLP02792 175 aaPredicted RBP16.52■□□□□ 0.24
VARS-216ENST00000428445 ITGB2P05107 769 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 CR2P20023 1033 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 ADCY8P40145 1251 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 AP1S1P61966 158 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 RFTN1Q14699 578 aaPredicted RBP16.52■□□□□ 0.24
VARS-216ENST00000428445 E4F1Q66K89 784 aaPredicted RBP16.52■□□□□ 0.24
VARS-216ENST00000428445 RAET1GQ6H3X3 334 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 TRIM74Q86UV6 250 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 TMEM159Q96B96 161 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 DTD2Q96FN9 168 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 GSDMCQ9BYG8 508 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 MYO1AQ9UBC5 1043 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 MYO6Q9UM54 1294 aa16.52■□□□□ 0.24
VARS-216ENST00000428445 PDE2AO00408 941 aaPredicted RBP16.51■□□□□ 0.23
VARS-216ENST00000428445 TERTO14746 1132 aaKnown RBP16.51■□□□□ 0.23
VARS-216ENST00000428445 SUV39H1O43463 412 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 LRCH4O75427 683 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 CSF2RBP32927 897 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 CSRP3P50461 194 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 RENBPP51606 427 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 MYL5Q02045 173 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 ILF3Q12906 894 aaKnown RBP eCLIP16.51■□□□□ 0.23
VARS-216ENST00000428445 ZNF235Q14590 738 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 TSR1Q2NL82 804 aaKnown RBP16.51■□□□□ 0.23
VARS-216ENST00000428445 TMCO4Q5TGY1 634 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 TXNRD3NBQ6F5E7 133 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 SASS6Q6UVJ0 657 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 MARK2Q7KZI7 788 aaKnown RBP16.51■□□□□ 0.23
VARS-216ENST00000428445 ZNF571Q7Z3V5 609 aaPredicted RBP16.51■□□□□ 0.23
VARS-216ENST00000428445 ZNF438Q7Z4V0 828 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 PTRH1Q86Y79 214 aaKnown RBP16.51■□□□□ 0.23
VARS-216ENST00000428445 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.51■□□□□ 0.23
VARS-216ENST00000428445 ZSCAN1Q8NBB4 408 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 HSPH1Q92598 858 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 NKD1Q969G9 470 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 NUDCD1Q96RS6 583 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 AGAP2Q99490 1192 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 FUCA2Q9BTY2 467 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 HAUS4Q9H6D7 363 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 ZWILCHQ9H900 591 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 OCIAD1Q9NX40 245 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 CNOT8Q9UFF9 292 aaKnown RBP16.51■□□□□ 0.23
VARS-216ENST00000428445 PCYT1BQ9Y5K3 369 aaPredicted RBP16.51■□□□□ 0.23
VARS-216ENST00000428445 B3GALT1Q9Y5Z6 326 aa16.51■□□□□ 0.23
VARS-216ENST00000428445 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.5■□□□□ 0.23
VARS-216ENST00000428445 LRRC53A6NM62 1247 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 MAFKO60675 156 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 EML2O95834 649 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 SOD1P00441 154 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 PDHA1P08559 390 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 SKILP12757 684 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 ZNF135P52742 658 aaPredicted RBP16.5■□□□□ 0.23
VARS-216ENST00000428445 LIMK2P53671 638 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 BIRC2Q13490 618 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 IHHQ14623 411 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 ART4Q93070 314 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 SCAMP4Q969E2 229 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 RNF31Q96EP0 1072 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 TAAR9Q96RI9 348 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 SLC12A9Q9BXP2 914 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 ABCG8Q9H221 673 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 TRNAU1APQ9NX07 287 aaKnown RBP16.5■□□□□ 0.23
VARS-216ENST00000428445 PHTF1Q9UMS5 762 aa16.5■□□□□ 0.23
VARS-216ENST00000428445 TLN1Q9Y490 2541 aaKnown RBP16.49■□□□□ 0.23
VARS-216ENST00000428445 IGHV1OR21-1A0A087WYE8 117 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 A8MU76 341 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 DDX3XO00571 662 aaKnown RBP eCLIP16.49■□□□□ 0.23
VARS-216ENST00000428445 LIFP15018 202 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 ACTR1BP42025 376 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 GPR1P46091 355 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 HCAR3P49019 387 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 ACTR1AP61163 376 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 NR1D2Q14995 579 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 ASIC2Q16515 512 aa16.49■□□□□ 0.23
VARS-216ENST00000428445 SNAP47Q5SQN1 464 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms