RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 MSANTD3Q96H12 275 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 CDKN2AIPNLQ96HQ2 116 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 PPP1R16AQ96I34 528 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 KLF6Q99612 283 aaPredicted RBP12.06□□□□□ -0.48
RFC4-206ENST00000427785 RBBP8Q99708 897 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 GABRG3Q99928 467 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 SELENOSQ9BQE4 189 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 SLC6A17Q9H1V8 727 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 DYRK4Q9NR20 520 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 CATSPERZQ9NTU4 200 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 FBXO5Q9UKT4 447 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 PPIL1Q9Y3C6 166 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 ANKRD12Q6UB98 2062 aa12.06□□□□□ -0.48
RFC4-206ENST00000427785 IQANK1A0A1B0GTG1 560 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 A0A1W2PPM1 405 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 GOLGA8RI6L899 631 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 MID1O15344 667 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 ADRB3P13945 408 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 GLULP15104 373 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 CREB1P16220 341 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 BPIP17213 487 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 NR1D1P20393 614 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 PSMA3P25788 255 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 HMGCLP35914 325 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 SERPINB9P50453 376 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 NEK3P51956 506 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 STC1P52823 247 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 LIMK2P53671 638 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 CSE1LP55060 971 aaKnown RBP12.05□□□□□ -0.48
RFC4-206ENST00000427785 POLR2LP62875 67 aaKnown RBP12.05□□□□□ -0.48
RFC4-206ENST00000427785 PDE1BQ01064 536 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 PEX6Q13608 980 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 ARHGEF7Q14155 803 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 STARD3Q14849 445 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 E2F5Q15329 346 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 CST6Q15828 149 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 ZRANB3Q5FWF4 1079 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 ZNF789Q5FWF6 425 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 MROH9Q5TGP6 573 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 ZNF776Q68DI1 518 aaPredicted RBP12.05□□□□□ -0.48
RFC4-206ENST00000427785 Q6ZS52 159 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 RFLNAQ6ZTI6 216 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 C4orf33Q8N1A6 199 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 C2CD4AQ8NCU7 369 aaPredicted RBP12.05□□□□□ -0.48
RFC4-206ENST00000427785 OR2T3Q8NH03 318 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 OR4L1Q8NH43 312 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 CALML6Q8TD86 181 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 VPS39Q96JC1 886 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 SRPK1Q96SB4 655 aaKnown RBP12.05□□□□□ -0.48
RFC4-206ENST00000427785 WRAP53Q9BUR4 548 aaKnown RBP12.05□□□□□ -0.48
RFC4-206ENST00000427785 RSPH9Q9H1X1 276 aaPredicted RBP12.05□□□□□ -0.48
RFC4-206ENST00000427785 FAM96AQ9H5X1 160 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 ARHGEF3Q9NR81 526 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 NSMCE4AQ9NXX6 385 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 OGFRQ9NZT2 677 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 SORCS3Q9UPU3 1222 aa12.05□□□□□ -0.48
RFC4-206ENST00000427785 UNC80Q8N2C7 3258 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 HMX2A2RU54 273 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 GAPDHSO14556 408 aaPredicted RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 CD3EAPO15446 510 aaKnown RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 KRT37O76014 449 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 KRT38O76015 456 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 ITGA2BP08514 1039 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 SNRPAP09012 282 aaKnown RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 OGNP20774 298 aaKnown RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 GABRB3P28472 473 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 SPAM1P38567 509 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 HADHAP40939 763 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 P2RY2P41231 377 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 CD151P48509 253 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 CDKN1CP49918 316 aaPredicted RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 COPAP53621 1224 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 GYS2P54840 703 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 MRPS21P82921 87 aaKnown RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 XIAPP98170 497 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 SATB1Q01826 763 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 CNTN1Q12860 1018 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 CCINQ13939 588 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 FASTKD1Q53R41 847 aaKnown RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 GRTP1Q5TC63 336 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 SDE2Q6IQ49 451 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 PSAPL1Q6NUJ1 521 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 ERAP2Q6P179 960 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 FBXL19Q6PCT2 694 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 CNSTQ6PJW8 725 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 ERN2Q76MJ5 926 aaKnown RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 TRMT11Q7Z4G4 463 aaKnown RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 HSD11B1LQ7Z5J1 315 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 EXOC3L1Q86VI1 746 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 ZC3HC1Q86WB0 502 aaKnown RBP12.04□□□□□ -0.48
RFC4-206ENST00000427785 CILP2Q8IUL8 1156 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 AADATQ8N5Z0 425 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 ACVR1CQ8NER5 493 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 FAM76AQ8TAV0 307 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 SERAC1Q96JX3 654 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 RHOJQ9H4E5 214 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 PCMTD2Q9NV79 361 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 SERGEFQ9UGK8 458 aa12.04□□□□□ -0.48
RFC4-206ENST00000427785 CD84Q9UIB8 345 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms