RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 CARS2Q9HA77 564 aaKnown RBP18.4■□□□□ 0.54
GPC1-205ENST00000427506 PCDHA13Q9Y5I0 950 aa18.4■□□□□ 0.54
GPC1-205ENST00000427506 CAPN8A6NHC0 703 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 BRINP1O60477 761 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 ZNF75DP51815 510 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 RPL26P61254 145 aaKnown RBP18.39■□□□□ 0.53
GPC1-205ENST00000427506 IFI35P80217 286 aaPredicted RBP18.39■□□□□ 0.53
GPC1-205ENST00000427506 CDK3Q00526 305 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 PTSQ03393 145 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 ZBTB17Q13105 803 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 MFSD7Q6UXD7 560 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 RBM44Q6ZP01 1051 aaKnown RBP18.39■□□□□ 0.53
GPC1-205ENST00000427506 RFLNAQ6ZTI6 216 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 WDR48Q8TAF3 677 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 CEP41Q9BYV8 373 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 RBSNQ9H1K0 784 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 ABCG8Q9H221 673 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 DPEP2Q9H4A9 486 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 RPL26L1Q9UNX3 145 aaKnown RBP18.39■□□□□ 0.53
GPC1-205ENST00000427506 ALG6Q9Y672 507 aa18.39■□□□□ 0.53
GPC1-205ENST00000427506 B4DGG1 531 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 PSTPIP1O43586 416 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 TCEA3O75764 348 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 CLDN7O95471 211 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 PRLP01236 227 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 MPOP05164 745 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 TEAD1P28347 426 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 ACTN2P35609 894 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 GNPDA1P46926 289 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 HADHBP55084 474 aaKnown RBP18.38■□□□□ 0.53
GPC1-205ENST00000427506 GABREP78334 506 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 SKOR1P84550 965 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 DPTQ07507 201 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 SPIDRQ14159 915 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 TFDP2Q14188 446 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 ISXQ2M1V0 245 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 COL28A1Q2UY09 1125 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 KAZNQ674X7 775 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 DOK6Q6PKX4 331 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 LRRC69Q6ZNQ3 347 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 B4GALNT4Q76KP1 1039 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 BZW1Q7L1Q6 419 aaKnown RBP18.38■□□□□ 0.53
GPC1-205ENST00000427506 CNTD1Q8N815 330 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 OR6C4Q8NGE1 309 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 CCL4L1Q8NHW4 92 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 SCAMP4Q969E2 229 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 CCDC74AQ96AQ1 378 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 AGAP3Q96P47 875 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 MLPHQ9BV36 600 aaPredicted RBP18.38■□□□□ 0.53
GPC1-205ENST00000427506 ADGRE3Q9BY15 652 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 BRD8Q9H0E9 1235 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 GOLPH3Q9H4A6 298 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 TFR2Q9UP52 801 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 MYLKQ15746 1914 aa18.38■□□□□ 0.53
GPC1-205ENST00000427506 C1orf232A0A0U1RR37 186 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 RRP8O43159 456 aaKnown RBP18.37■□□□□ 0.53
GPC1-205ENST00000427506 TLX3O43711 291 aaPredicted RBP18.37■□□□□ 0.53
GPC1-205ENST00000427506 LCA5LO95447 670 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 CEACAM5P06731 702 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 MMP2P08253 660 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 CDKN2BP42772 138 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 STC1P52823 247 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 ILF3Q12906 894 aaKnown RBP eCLIP18.37■□□□□ 0.53
GPC1-205ENST00000427506 LLGL1Q15334 1064 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 FAM182AQ5T1J6 154 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 KDELC2Q7Z4H8 507 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 FGF11Q92914 225 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 MRFAP1L1Q96HT8 127 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 OLFM3Q96PB7 478 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 PANX2Q96RD6 677 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 GSDMCQ9BYG8 508 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 FRMD8Q9BZ67 464 aaPredicted RBP18.37■□□□□ 0.53
GPC1-205ENST00000427506 SUFUQ9UMX1 484 aa18.37■□□□□ 0.53
GPC1-205ENST00000427506 WDFY3Q8IZQ1 3526 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 A0A087WV48 116 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 ANKRD66B4E2M5 251 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 CST8O60676 142 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 LRP4O75096 1905 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 IPO7O95373 1038 aaKnown RBP18.36■□□□□ 0.53
GPC1-205ENST00000427506 PYGLP06737 847 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 POLD2P49005 469 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 NR2C2P49116 596 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 QPCTQ16769 361 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 C3orf38Q5JPI3 329 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 ADAMTSL4Q6UY14 1074 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 SPOCD1Q6ZMY3 1216 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 ZNF765Q7L2R6 523 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 NT5DC3Q86UY8 548 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 CCDC50Q8IVM0 306 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 NRSN1Q8IZ57 195 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 LSMEM2Q8N112 164 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 GPR156Q8NFN8 814 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 KIAA1524Q8TCG1 905 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 CCHCR1Q8TD31 782 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 GRAMD1AQ96CP6 724 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 ATXN7L3BQ96GX2 97 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 GFM1Q96RP9 751 aaKnown RBP18.36■□□□□ 0.53
GPC1-205ENST00000427506 RIOK2Q9BVS4 552 aaKnown RBP18.36■□□□□ 0.53
GPC1-205ENST00000427506 POLR1BQ9H9Y6 1135 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 SAE1Q9UBE0 346 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms