RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 ENPP3O14638 875 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 SYN3O14994 580 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 RNASEH2AO75792 299 aaKnown RBP11.61□□□□□ -0.55
FIRRE-201ENST00000427391 CDK14O94921 469 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 KLKB1P03952 638 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 RPLP2P05387 115 aaKnown RBP11.61□□□□□ -0.55
FIRRE-201ENST00000427391 MTHFD2P13995 350 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 CHRM3P20309 590 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 IMPDH1P20839 514 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 FDXRP22570 491 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 FGFR3P22607 806 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 PMLP29590 882 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 VEGFBP49765 207 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 GRB7Q14451 532 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 DEFB115Q30KQ5 88 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 PARP15Q460N3 678 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 OGFRL1Q5TC84 451 aaPredicted RBP11.61□□□□□ -0.55
FIRRE-201ENST00000427391 IL23RQ5VWK5 629 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 PAQR3Q6TCH7 311 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 CHSY3Q70JA7 882 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 OR4L1Q8NH43 312 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 TRPC4APQ8TEL6 797 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 CAPNS2Q96L46 248 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 MRPL1Q9BYD6 325 aaKnown RBP11.61□□□□□ -0.55
FIRRE-201ENST00000427391 MID1IP1Q9NPA3 183 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 RIMS3Q9UJD0 308 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 DNAJC15Q9Y5T4 150 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 PRORSD1PA6NEY8 169 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 OR1I1O60431 355 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 ALDH2P05091 517 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 SERPINF2P08697 491 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 ZNF37AP17032 561 aaPredicted RBP11.61□□□□□ -0.55
FIRRE-201ENST00000427391 DNAJB1P25685 340 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 SOX11P35716 441 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 HK2P52789 917 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 GPR17Q13304 367 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 HERC3Q15034 1050 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 GSTA3Q16772 222 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 SETMARQ53H47 684 aaPredicted RBP11.61□□□□□ -0.55
FIRRE-201ENST00000427391 SCIMPQ6UWF3 145 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 FUNDC1Q8IVP5 155 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 EFHBQ8N7U6 833 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 MDGA1Q8NFP4 955 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 CDKN2AIPNLQ96HQ2 116 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 ZNF512Q96ME7 567 aaPredicted RBP11.61□□□□□ -0.55
FIRRE-201ENST00000427391 PRICKLE1Q96MT3 831 aaPredicted RBP11.61□□□□□ -0.55
FIRRE-201ENST00000427391 AKTIPQ9H8T0 292 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 EML4Q9HC35 981 aaKnown RBP11.61□□□□□ -0.55
FIRRE-201ENST00000427391 STARD7Q9NQZ5 370 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 CATSPERZQ9NTU4 200 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 ZDHHC7Q9NXF8 308 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 MED16Q9Y2X0 877 aa11.61□□□□□ -0.55
FIRRE-201ENST00000427391 SLC38A8A6NNN8 435 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 CBX4O00257 560 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 CDC7O00311 574 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 CASQ2O14958 399 aaPredicted RBP11.6□□□□□ -0.55
FIRRE-201ENST00000427391 RPP40O75818 363 aaKnown RBP11.6□□□□□ -0.55
FIRRE-201ENST00000427391 PRDX3P30048 256 aaKnown RBP11.6□□□□□ -0.55
FIRRE-201ENST00000427391 AGTR2P50052 363 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 GNA12Q03113 381 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 PDK3Q15120 406 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 UGT3A2Q3SY77 523 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 FAM45BPQ6NSW5 357 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 LRRC8DQ7L1W4 858 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 SETD3Q86TU7 594 aaPredicted RBP11.6□□□□□ -0.55
FIRRE-201ENST00000427391 PIANPQ8IYJ0 282 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 ICA1LQ8NDH6 482 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 FAM45AQ8TCE6 357 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 CD99L2Q8TCZ2 262 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 LRGUKQ96M69 825 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 TSC22D3Q99576 134 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 SEMA4BQ9NPR2 832 aaPredicted RBP11.6□□□□□ -0.55
FIRRE-201ENST00000427391 UBAP1Q9NZ09 502 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 FNIP2Q9P278 1114 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 TIMM22Q9Y584 194 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 PCDHB7Q9Y5E2 793 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 PIP5K1BO14986 540 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 BCAS2O75934 225 aaPredicted RBP11.6□□□□□ -0.55
FIRRE-201ENST00000427391 RTN3O95197 1032 aaPredicted RBP11.6□□□□□ -0.55
FIRRE-201ENST00000427391 PGM3O95394 542 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 FGF1P05230 155 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 LINC00032P0C843 101 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 GFAPP14136 432 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 PAX3P23760 479 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 APLP1P51693 650 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 POLE2P56282 527 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 HERVK_113P63132 956 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 CDKL1Q00532 357 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 LRP8Q14114 963 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 ADGRE1Q14246 886 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 TSNQ15631 228 aaKnown RBP11.6□□□□□ -0.55
FIRRE-201ENST00000427391 RETREG3Q86VR2 466 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 DDIASQ8IXT1 998 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 LPCAT1Q8NF37 534 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
FIRRE-201ENST00000427391 BRSK1Q8TDC3 778 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 C19orf60Q96EN9 201 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 FEM1CQ96JP0 617 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 GBP5Q96PP8 586 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms