RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ARRDC3Q96B67 414 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 SEC16BQ96JE7 1060 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 CABS1Q96KC9 395 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 KLHL32Q96NJ5 620 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 SEMA3CQ99985 751 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 MGME1Q9BQP7 344 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 VPS11Q9H270 941 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 PLAC1Q9HBJ0 212 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 SCUBE2Q9NQ36 999 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 MKS1Q9NXB0 559 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 FAM169AQ9Y6X4 670 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 R4GN57 208 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 DMDP11532 3685 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 NUMA1Q14980 2115 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 CCDC163A0A0D9SF12 145 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 TCP11X1B4DZS4 312 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 C1QTNF3-AMACRE9PGA6 284 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 ADH1BP00325 375 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 CR2P20023 1033 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 C5AR1P21730 350 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 RPA3P35244 121 aaPredicted RBP15.66■□□□□ 0.1
SHOX2-202ENST00000425436 CSNK1DP48730 415 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 DSC2Q02487 901 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 ZBTB16Q05516 673 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 NIPAL4Q0D2K0 466 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 MPP3Q13368 585 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 IHHQ14623 411 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 CRYMQ14894 314 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 PDK4Q16654 411 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 MAP7D1Q3KQU3 841 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 FAM46CQ5VWP2 391 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 NCEH1Q6PIU2 408 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 FOXR1Q6PIV2 292 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 GDPD4Q6W3E5 623 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 OXNAD1Q96HP4 312 aaPredicted RBP15.66■□□□□ 0.1
SHOX2-202ENST00000425436 APOPT1Q96IL0 206 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 NUDCD1Q96RS6 583 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 PRRX2Q99811 253 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 OMDQ99983 421 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 GORASP1Q9BQQ3 440 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 MLPHQ9BV36 600 aaPredicted RBP15.66■□□□□ 0.1
SHOX2-202ENST00000425436 FAM126AQ9BYI3 521 aaPredicted RBP15.66■□□□□ 0.1
SHOX2-202ENST00000425436 IQCGQ9H095 443 aaKnown RBP15.66■□□□□ 0.1
SHOX2-202ENST00000425436 VPS45Q9NRW7 570 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 SYBUQ9NX95 663 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 NSMCE4AQ9NXX6 385 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 USP36Q9P275 1121 aaKnown RBP15.66■□□□□ 0.1
SHOX2-202ENST00000425436 TXNDC16Q9P2K2 825 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 RAPGEFL1Q9UHV5 662 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 PCDHGC4Q9Y5F7 938 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 RPS6KL1Q9Y6S9 549 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 MYO15AQ9UKN7 3530 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 ABCA7Q8IZY2 2146 aa15.66■□□□□ 0.1
SHOX2-202ENST00000425436 CXorf49A8MYA2 514 aaPredicted RBP15.65■□□□□ 0.1
SHOX2-202ENST00000425436 FOXO6A8MYZ6 492 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 TRIM49D1C9J1S8 452 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 F5H423 210 aaPredicted RBP15.65■□□□□ 0.1
SHOX2-202ENST00000425436 DRD3P35462 400 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 P2RY2P41231 377 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 WDR4P57081 412 aaKnown RBP15.65■□□□□ 0.1
SHOX2-202ENST00000425436 PPARDQ03181 441 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 CNTN1Q12860 1018 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 TTC31Q49AM3 519 aaPredicted RBP15.65■□□□□ 0.1
SHOX2-202ENST00000425436 GRTP1Q5TC63 336 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 DEFB119Q8N690 84 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
SHOX2-202ENST00000425436 ZBTB44Q8NCP5 570 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 PAIP2Q9BPZ3 127 aaKnown RBP15.65■□□□□ 0.1
SHOX2-202ENST00000425436 TBL1YQ9BQ87 522 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 CPEB1Q9BZB8 566 aaKnown RBP15.65■□□□□ 0.1
SHOX2-202ENST00000425436 POLR1EQ9GZS1 481 aaKnown RBP15.65■□□□□ 0.1
SHOX2-202ENST00000425436 SLC25A51Q9H1U9 297 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 MBD1Q9UIS9 605 aaPredicted RBP15.65■□□□□ 0.1
SHOX2-202ENST00000425436 NCKAP1Q9Y2A7 1128 aa15.65■□□□□ 0.1
SHOX2-202ENST00000425436 IGHV1OR15-9A0A0B4J2B8 117 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 COPEO14579 308 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 ZNF217O75362 1048 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 RPP40O75818 363 aaKnown RBP15.64■□□□□ 0.09
SHOX2-202ENST00000425436 C7P10643 843 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 BCKDHBP21953 392 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 ACSL1P33121 698 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 BCL2L1Q07817 233 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 ZNF805Q5CZA5 627 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 PCID2Q5JVF3 399 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 SH2D5Q6ZV89 423 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 TRIM42Q8IWZ5 723 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 GDAP1Q8TB36 358 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 ARRDC2Q8TBH0 407 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 LRRC8CQ8TDW0 803 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 CERS2Q96G23 380 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 TOE1Q96GM8 510 aaKnown RBP15.64■□□□□ 0.09
SHOX2-202ENST00000425436 LRIG1Q96JA1 1093 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 CPNE1Q99829 537 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 KIFC1Q9BW19 673 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 SUV39H2Q9H5I1 410 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 ATP13A3Q9H7F0 1226 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 MRM3Q9HC36 420 aaKnown RBP15.64■□□□□ 0.09
SHOX2-202ENST00000425436 DYRK4Q9NR20 520 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 FAM86C1Q9NVL1 165 aa15.64■□□□□ 0.09
SHOX2-202ENST00000425436 ZFATQ9P243 1243 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms