RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 LTA4HP09960 611 aaKnown RBP26.47■■□□□ 1.83
LDB1-202ENST00000425280 HOXB8P17481 243 aaPredicted RBP26.47■■□□□ 1.83
LDB1-202ENST00000425280 SERPINA4P29622 427 aa26.47■■□□□ 1.83
LDB1-202ENST00000425280 KPNA2P52292 529 aaKnown RBP26.47■■□□□ 1.83
LDB1-202ENST00000425280 SULT2A1Q06520 285 aa26.47■■□□□ 1.83
LDB1-202ENST00000425280 KIAA0907Q7Z7F0 614 aaPredicted RBP26.47■■□□□ 1.83
LDB1-202ENST00000425280 MTDHQ86UE4 582 aaKnown RBP26.47■■□□□ 1.83
LDB1-202ENST00000425280 PIANPQ8IYJ0 282 aa26.47■■□□□ 1.83
LDB1-202ENST00000425280 LPGAT1Q92604 370 aa26.47■■□□□ 1.83
LDB1-202ENST00000425280 AARSD1Q9BTE6 412 aaKnown RBP26.47■■□□□ 1.83
LDB1-202ENST00000425280 GATA5Q9BWX5 397 aaPredicted RBP26.47■■□□□ 1.83
LDB1-202ENST00000425280 CEP44Q9C0F1 390 aa26.47■■□□□ 1.83
LDB1-202ENST00000425280 ZMYND15Q9H091 742 aa26.47■■□□□ 1.83
LDB1-202ENST00000425280 NKX2-4Q9H2Z4 354 aa26.47■■□□□ 1.83
LDB1-202ENST00000425280 PKP3Q9Y446 797 aa26.47■■□□□ 1.83
LDB1-202ENST00000425280 MTF2Q9Y483 593 aaPredicted RBP26.47■■□□□ 1.83
LDB1-202ENST00000425280 TRIM24O15164 1050 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 HMGCLP35914 325 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 ACCSLQ4AC99 568 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 AGAP9Q5VTM2 703 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 LIPMQ5VYY2 423 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 PSAPL1Q6NUJ1 521 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 ZSWIM9Q86XI8 627 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 PIWIL2Q8TC59 973 aaKnown RBP26.46■■□□□ 1.83
LDB1-202ENST00000425280 PPP4R1Q8TF05 950 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 FAM96AQ9H5X1 160 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 TMEM114B3SHH9 223 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 DLX3O60479 287 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 XIAPP98170 497 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 KCNC3Q14003 757 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 TMEM215Q68D42 235 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 PCDH20Q8N6Y1 951 aaKnown RBP26.46■■□□□ 1.83
LDB1-202ENST00000425280 PAF1Q8N7H5 531 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.46■■□□□ 1.83
LDB1-202ENST00000425280 SLC2A11Q9BYW1 496 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 SFXN1Q9H9B4 322 aa26.46■■□□□ 1.83
LDB1-202ENST00000425280 FNDC3AQ9Y2H6 1198 aaKnown RBP26.46■■□□□ 1.83
LDB1-202ENST00000425280 BNIP3LO60238 219 aa26.45■■□□□ 1.83
LDB1-202ENST00000425280 NDUFS3O75489 264 aa26.45■■□□□ 1.83
LDB1-202ENST00000425280 WEE1P30291 646 aa26.45■■□□□ 1.83
LDB1-202ENST00000425280 SUOXP51687 545 aa26.45■■□□□ 1.83
LDB1-202ENST00000425280 AQP5P55064 265 aa26.45■■□□□ 1.83
LDB1-202ENST00000425280 TECRLQ5HYJ1 363 aa26.45■■□□□ 1.83
LDB1-202ENST00000425280 TUBGCP5Q96RT8 1024 aa26.45■■□□□ 1.83
LDB1-202ENST00000425280 LMAN2LQ9H0V9 348 aa26.45■■□□□ 1.83
LDB1-202ENST00000425280 CAPN7Q9Y6W3 813 aa26.45■■□□□ 1.83
LDB1-202ENST00000425280 C2orf16Q68DN1 1984 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 UBA6A0AVT1 1052 aaPredicted RBP26.45■■□□□ 1.82
LDB1-202ENST00000425280 HNF1BP35680 557 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 SLC26A3P40879 764 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 VIPR2P41587 438 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 PRKAA2P54646 552 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 DHCR24Q15392 516 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 CARD16Q5EG05 197 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 ZRANB3Q5FWF4 1079 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 SKA1Q96BD8 255 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 ECT2Q9H8V3 914 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 PNPOQ9NVS9 261 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 DUS2Q9NX74 493 aaKnown RBP26.45■■□□□ 1.82
LDB1-202ENST00000425280 ZFP69BQ9UJL9 534 aa26.45■■□□□ 1.82
LDB1-202ENST00000425280 EPOPA6NHQ4 379 aa26.44■■□□□ 1.82
LDB1-202ENST00000425280 SERPINB3P29508 390 aa26.44■■□□□ 1.82
LDB1-202ENST00000425280 FMO4P31512 558 aa26.44■■□□□ 1.82
LDB1-202ENST00000425280 CCNHP51946 323 aaPredicted RBP26.44■■□□□ 1.82
LDB1-202ENST00000425280 NCALDP61601 193 aa26.44■■□□□ 1.82
LDB1-202ENST00000425280 CDKN3Q16667 212 aa26.44■■□□□ 1.82
LDB1-202ENST00000425280 KLC3Q6P597 504 aa26.44■■□□□ 1.82
LDB1-202ENST00000425280 AHI1Q8N157 1196 aa26.44■■□□□ 1.82
LDB1-202ENST00000425280 MYLIPQ8WY64 445 aa26.44■■□□□ 1.82
LDB1-202ENST00000425280 ZFYVE1Q9HBF4 777 aa26.44■■□□□ 1.82
LDB1-202ENST00000425280 CAPN8A6NHC0 703 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 DNAJC8O75937 253 aaPredicted RBP26.43■■□□□ 1.82
LDB1-202ENST00000425280 CYP17A1P05093 508 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 DPY19L3Q6ZPD9 716 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 WDR75Q8IWA0 830 aaKnown RBP26.43■■□□□ 1.82
LDB1-202ENST00000425280 NPAS3Q8IXF0 933 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 C10orf67Q8IYJ2 551 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 OSCP1Q8WVF1 389 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 SGF29Q96ES7 293 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 CPEB1Q9BZB8 566 aaKnown RBP26.43■■□□□ 1.82
LDB1-202ENST00000425280 POPDC3Q9HBV1 291 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 FBXO10Q9UK96 956 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 LAMA3Q16787 3333 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 C1orf232A0A0U1RR37 186 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 HSPA4LO95757 839 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 MAGEA9P43362 315 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 TTPAP49638 278 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 ACAP2Q15057 778 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 GEN1Q17RS7 908 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 PPP2R2DQ66LE6 453 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 TRIM68Q6AZZ1 485 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 CLNKQ7Z7G1 428 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 ECHDC3Q96DC8 303 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 MOCOSQ96EN8 888 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 SIKE1Q9BRV8 207 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 SUV39H2Q9H5I1 410 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 ERVW-1Q9UQF0 538 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 VPS9D1Q9Y2B5 631 aa26.43■■□□□ 1.82
LDB1-202ENST00000425280 POP4O95707 220 aaKnown RBP26.42■■□□□ 1.82
LDB1-202ENST00000425280 POLR2EP19388 210 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms