RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 XKRXQ6PP77 449 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 CLEC9AQ6UXN8 241 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 GFRALQ6UXV0 394 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 LEKR1Q6ZMV7 388 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 SETD3Q86TU7 594 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-203ENST00000424270 CUZD1Q86UP6 607 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 C12orf56Q8IXR9 622 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 ANKK1Q8NFD2 765 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 OR2AP1Q8NGE2 309 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 FAR1Q8WVX9 515 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 SH3KBP1Q96B97 665 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 MTFMTQ96DP5 389 aaKnown RBP6.3□□□□□ -1.4
SDCBP-203ENST00000424270 GDAP1L1Q96MZ0 367 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 TGM7Q96PF1 710 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 POPDC2Q9HBU9 364 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 PHPT1Q9NRX4 125 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-203ENST00000424270 FAM13BQ9NYF5 915 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 PDP2Q9P2J9 529 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 CNOT8Q9UFF9 292 aaKnown RBP6.3□□□□□ -1.4
SDCBP-203ENST00000424270 ZNHIT2Q9UHR6 403 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 PLEKHM1Q9Y4G2 1056 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 HS3ST4Q9Y661 456 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 C19orf84I3L1E1 186 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 O00370 1275 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 MAP3K7O43318 606 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 SRGAP2O75044 1071 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 PAGE1O75459 146 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 ZNF821O75541 412 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 IGSF6O95976 241 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 NR3C1P04150 777 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 FYNP06241 537 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 KLK3P07288 261 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 ELFN1P0C7U0 828 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 MYCLP1P12525 358 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 FOSL1P15407 271 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 AMD1P17707 334 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 LPOP22079 712 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 PCSK6P29122 969 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 OTX2P32243 289 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 SCNN1AP37088 669 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 PBX1P40424 430 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 MEOX1P50221 254 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 NDST2P52849 883 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 IST1P53990 364 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 YWHAZP63104 245 aaKnown RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 CEBPZQ03701 1054 aaKnown RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 TUBB3Q13509 450 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 ATP1A4Q13733 1029 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 ACOX1Q15067 660 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 CEBPEQ15744 281 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 TMEM52BQ4KMG9 183 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 ALFQ53S48 1182 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 TMCO4Q5TGY1 634 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 IRAK1BP1Q5VVH5 260 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 TMEM207Q6UWW9 146 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 CENPQQ7L2Z9 268 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 EPM2AIP1Q7L775 607 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 C17orf82Q86X59 251 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 PRIMA1Q86XR5 153 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 NRROSQ86YC3 692 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 RAB43Q86YS6 212 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 DRC7Q8IY82 874 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 DNAJB14Q8TBM8 379 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 SLC37A2Q8TED4 501 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 RELTQ969Z4 430 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 HSFY1Q96LI6 401 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 CLIC6Q96NY7 704 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 MLPHQ9BV36 600 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 LGR4Q9BXB1 951 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 TNMDQ9H2S6 317 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 TRNAU1APQ9NX07 287 aaKnown RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 SIDT1Q9NXL6 827 aaKnown RBP6.29□□□□□ -1.4
SDCBP-203ENST00000424270 MPP6Q9NZW5 540 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 RARRES3Q9UL19 164 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 SUFUQ9UMX1 484 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 BTRCQ9Y297 605 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 PCDHGC4Q9Y5F7 938 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 ACTL7AQ9Y615 435 aa6.29□□□□□ -1.4
SDCBP-203ENST00000424270 CHD5Q8TDI0 1954 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 TACC2O95359 2948 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 A0A1W2PQJ5 194 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 RNF212BA8MTL3 300 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 A8MX80 341 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 PEX12O00623 359 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 E2F3O00716 465 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 CREB3O43889 395 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 BUB1BO60566 1050 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 SNX2O60749 519 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 GADD45BO75293 160 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 RECQL5O94762 991 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 GSRP00390 522 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 TYRP1P17643 537 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 DNAJA1P31689 397 aaKnown RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 ADCY8P40145 1251 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 ACADSBP45954 432 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 SUOXP51687 545 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 GFERP55789 205 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 MARSP56192 900 aaKnown RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 RHOAP61586 193 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms