RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CSPG4P5Q96PW8 444 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 ARHGAP9Q9BRR9 750 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 CDH19Q9H159 772 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 CBX8Q9HC52 389 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 AIPL1Q9NZN9 384 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 TAAR2Q9P1P5 351 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 PHTF1Q9UMS5 762 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 PCDHB11Q9Y5F2 797 aa16.14■□□□□ 0.17
COL18A1-205ENST00000423214 ZNF106Q9H2Y7 1883 aaKnown RBP16.14■□□□□ 0.17
COL18A1-205ENST00000423214 SPTA1P02549 2419 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 A0A1W2PQC6 194 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 NPIPB15A6NHN6 443 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-205ENST00000423214 MAFKO60675 156 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 CPNE6O95741 557 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 SERPINC1P01008 464 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 CR2P20023 1033 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 LHCGRP22888 699 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 AMPD1P23109 780 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 IL1R2P27930 398 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 ALDH4A1P30038 563 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 ETV5P41161 510 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 MMP13P45452 471 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 MAXP61244 160 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 CDK3Q00526 305 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 TRAF2Q12933 501 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 RALGPS1Q5JS13 557 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 ARMC12Q5T9G4 340 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 TMEM164Q5U3C3 297 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 DOK6Q6PKX4 331 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 SLC30A9Q6PML9 568 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 POLNQ7Z5Q5 900 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 LUZP1Q86V48 1076 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 PGBD5Q8N414 524 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 ZSCAN1Q8NBB4 408 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 SGF29Q96ES7 293 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 TEX101Q9BY14 249 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 FRMD8Q9BZ67 464 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-205ENST00000423214 SEMA6CQ9H3T2 930 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 RDH14Q9HBH5 336 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 NOD2Q9HC29 1040 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 SPATS2LQ9NUQ6 558 aaKnown RBP16.13■□□□□ 0.17
COL18A1-205ENST00000423214 ETNK2Q9NVF9 386 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 TRNAU1APQ9NX07 287 aaKnown RBP16.13■□□□□ 0.17
COL18A1-205ENST00000423214 SUFUQ9UMX1 484 aa16.13■□□□□ 0.17
COL18A1-205ENST00000423214 HEMK1Q9Y5R4 338 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-205ENST00000423214 A0A1B0GTH6 734 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 EFSO43281 561 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 SLC28A2O43868 658 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 CEACAM5P06731 702 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 AK4P27144 223 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-205ENST00000423214 CD82P27701 267 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 KRT81Q14533 505 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 BOLA3Q53S33 107 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 MARC1Q5VT66 337 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 PRICKLE2Q7Z3G6 844 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 TMPRSS9Q7Z410 1059 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 HSD11B1LQ7Z5J1 315 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 VASH2Q86V25 355 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 NDUFAF2Q8N183 169 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 USP7Q93009 1102 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 NT5MQ9NPB1 228 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 FOXJ2Q9P0K8 574 aa16.12■□□□□ 0.17
COL18A1-205ENST00000423214 PGLSO95336 258 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 ECEL1O95672 775 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 PEX11BO96011 259 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 RARAP10276 462 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 SKILP12757 684 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 TCF4P15884 667 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 CTPS1P17812 591 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 TEAD1P28347 426 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 GPR1P46091 355 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 PPM1FP49593 454 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-205ENST00000423214 EPHB1P54762 984 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 OR1D5P58170 312 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 B4GALNT1Q00973 533 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 ITKQ08881 620 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 SRSF6Q13247 344 aaKnown RBP16.11■□□□□ 0.17
COL18A1-205ENST00000423214 PIGHQ14442 188 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-205ENST00000423214 NR1I3Q14994 352 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 C16orf72Q14CZ0 275 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 CLPPQ16740 277 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-205ENST00000423214 Q6ZVL8 140 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 ZNF438Q7Z4V0 828 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 TSPAN33Q86UF1 283 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 ZFAND4Q86XD8 727 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 NRROSQ86YC3 692 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 TEKT4Q8WW24 435 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 SCRN2Q96FV2 425 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 OR2M4Q96R27 311 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 MCCC1Q96RQ3 725 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-205ENST00000423214 NUDT22Q9BRQ3 303 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 FAM117AQ9C073 453 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 ISCUQ9H1K1 167 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 PCDH18Q9HCL0 1135 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 HAUS2Q9NVX0 235 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 ANAPC7Q9UJX3 599 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 BOD1L1Q8NFC6 3051 aa16.11■□□□□ 0.17
COL18A1-205ENST00000423214 TLN1Q9Y490 2541 aaKnown RBP16.1■□□□□ 0.17
COL18A1-205ENST00000423214 C9orf172C9J069 976 aa16.1■□□□□ 0.17
COL18A1-205ENST00000423214 HGSO14964 777 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms