RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 T-ENOLP0DO92 83 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 GJA1P17302 382 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 GM2AP17900 193 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 DDX6P26196 483 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNX20-203ENST00000423026 PTPN4P29074 926 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 GRIA4P48058 902 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 ZNF140P52738 457 aaPredicted RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 HK2P52789 917 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 PGGT1BP53609 377 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 AP1S1P61966 158 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 PTPRCAPQ14761 206 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 KPNB1Q14974 876 aaKnown RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 ACAP2Q15057 778 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 GSTA3Q16772 222 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 ARHGAP15Q53QZ3 475 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 TMEM240Q5SV17 173 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 TPGS1Q6ZTW0 290 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 LDB1Q86U70 411 aaPredicted RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 LONP2Q86WA8 852 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 PAF1Q8N7H5 531 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 OR4K2Q8NGD2 314 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 PHOSPHO2Q8TCD6 241 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 SP7Q8TDD2 431 aaPredicted RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 HEXDCQ8WVB3 486 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 ALG14Q96F25 216 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 GPR78Q96P69 363 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 TCF12Q99081 682 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 OLFM1Q99784 485 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 TBC1D10AQ9BXI6 508 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 NMUR2Q9GZQ4 415 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 DRC3Q9H069 523 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 CCDC68Q9H2F9 335 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 VCX3BQ9H321 246 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 VCX3AQ9NNX9 186 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 CXXC1Q9P0U4 656 aaPredicted RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 PCDH10Q9P2E7 1040 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 MARCH4Q9P2E8 410 aaPredicted RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 LHX3Q9UBR4 397 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 BLOC1S6Q9UL45 172 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 CRYL1Q9Y2S2 319 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 TARM1B6A8C7 271 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 SLCO1B7G3V0H7 640 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 STX7O15400 261 aaKnown RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 CSPG5O95196 566 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 CCDC166P0CW27 439 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 PTPN2P17706 415 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 ATP5F1P24539 256 aaPredicted RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 TPP2P29144 1249 aaPredicted RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 MAPK8P45983 427 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 NAGLUP54802 743 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 TRAF2Q12933 501 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 DLG1Q12959 904 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 PRKAA1Q13131 559 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 RCN2Q14257 317 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 GPR158Q5T848 1215 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 ARMC12Q5T9G4 340 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 NAPRTQ6XQN6 538 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 SPATA6LQ8N4H0 392 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 TMEM151AQ8N4L1 468 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 EFHBQ8N7U6 833 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNX20-203ENST00000423026 FIBINQ8TAL6 211 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 SLC22A17Q8WUG5 538 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 POF1BQ8WVV4 589 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 SLC46A2Q9BY10 475 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 CDH19Q9H159 772 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 MTIF3Q9H2K0 278 aaKnown RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 TLR9Q9NR96 1032 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 NMRK1Q9NWW6 199 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 NCKIPSDQ9NZQ3 722 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 ARHGAP26Q9UNA1 814 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 RAP2CQ9Y3L5 183 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 SPO11Q9Y5K1 396 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.02□□□□□ -0.97
SNX20-203ENST00000423026 HIDE1A8MVS5 230 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 MAP3K13O43283 966 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 DLX3O60479 287 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 NDUFS3O75489 264 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 PENKP01210 267 aaPredicted RBP9.02□□□□□ -0.97
SNX20-203ENST00000423026 SLC4A1P02730 911 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 SBK3P0C264 359 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 ALOX15P16050 662 aaPredicted RBP9.02□□□□□ -0.97
SNX20-203ENST00000423026 CLCN4P51793 760 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 STC1P52823 247 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 ALDH18A1P54886 795 aaKnown RBP9.02□□□□□ -0.97
SNX20-203ENST00000423026 POLE2P56282 527 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 UBE3AQ05086 875 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 TYSND1Q2T9J0 566 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 HSF5Q4G112 596 aaPredicted RBP9.02□□□□□ -0.97
SNX20-203ENST00000423026 RNF220Q5VTB9 566 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 APCDD1Q8J025 514 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 ZNF781Q8N8C0 355 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 MDGA1Q8NFP4 955 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 WFDC5Q8TCV5 224 aa9.02□□□□□ -0.97
SNX20-203ENST00000423026 SH3RF2Q8TEC5 729 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms