RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 RFLNAQ6ZTI6 216 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 Q6ZVL8 140 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 SUMF1Q8NBK3 374 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 TP53I13Q8NBR0 393 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 TMEM145Q8NBT3 493 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 C1orf216Q8TAB5 229 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 NUS1Q96E22 293 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 LENG8Q96PV6 779 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 RANBP9Q96S59 729 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 KLF6Q99612 283 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 FZD3Q9NPG1 666 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 KCTD5Q9NXV2 234 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 PKD2L2Q9NZM6 624 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 IL17CQ9P0M4 197 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 NFKBIL1Q9UBC1 381 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 DMGDHQ9UI17 866 aaKnown RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 ANAPC5Q9UJX4 755 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 SLCO1B1Q9Y6L6 691 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 SDK1Q7Z5N4 2213 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 PTPRZ1P23471 2315 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 TP53BP1Q12888 1972 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 ATXN2Q99700 1313 aaKnown RBP16.96■□□□□ 0.31
COL7A1-202ENST00000422991 GPR179Q6PRD1 2367 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 GON4LQ3T8J9 2241 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 RGSL1A5PLK6 1076 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 GOLGA8CPA6NN73 597 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 C2orf81A6NN90 581 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 AVILO75366 819 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 MGAT1P26572 445 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 MAOBP27338 520 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 AKT2P31751 481 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 NPY2RP49146 381 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 DRG2P55039 364 aaKnown RBP16.96■□□□□ 0.31
COL7A1-202ENST00000422991 PDE1BQ01064 536 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 CALCOCO2Q13137 446 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 MTM1Q13496 603 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 IRF4Q15306 451 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 LPAL2Q16609 132 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 WSCD2Q2TBF2 565 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 ZNF765Q7L2R6 523 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 NRSN1Q8IZ57 195 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 CENPTQ96BT3 561 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 LOXL4Q96JB6 756 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 SERAC1Q96JX3 654 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 MYOCQ99972 504 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 FRMD8Q9BZ67 464 aaPredicted RBP16.96■□□□□ 0.31
COL7A1-202ENST00000422991 IL22Q9GZX6 179 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 BFARQ9NZS9 450 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 CD84Q9UIB8 345 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 RAB23Q9ULC3 237 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 KCTD3Q9Y597 815 aa16.96■□□□□ 0.31
COL7A1-202ENST00000422991 ZNF292O60281 2723 aa16.96■□□□□ 0.3
COL7A1-202ENST00000422991 ESYT3A0FGR9 886 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 HEATR9A2RTY3 570 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 MROH6A6NGR9 719 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 PRAMEF26H0Y7S4 382 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 BUD23O43709 281 aaKnown RBP16.95■□□□□ 0.3
COL7A1-202ENST00000422991 EPN2O95208 641 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 BPIP17213 487 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 LPOP22079 712 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-202ENST00000422991 IGFALSP35858 605 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 DCDC1P59894 354 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 CRADDP78560 199 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 GUCY2DQ02846 1103 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 LRRC14Q15048 493 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 TRADDQ15628 312 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 CCDC38Q502W7 563 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 PEAR1Q5VY43 1037 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-202ENST00000422991 LAIR1Q6GTX8 287 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 GCNT7Q6ZNI0 430 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 RGL4Q8IZJ4 473 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 ZCCHC9Q8N567 271 aaKnown RBP16.95■□□□□ 0.3
COL7A1-202ENST00000422991 PPHLN1Q8NEY8 458 aaKnown RBP16.95■□□□□ 0.3
COL7A1-202ENST00000422991 SLC6A18Q96N87 628 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 C19orf43Q9BQ61 176 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 HINFPQ9BQA5 517 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 MIR1-1HGQ9H1L0 117 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 ABCG8Q9H221 673 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 BPIFA1Q9NP55 256 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 MBNL1Q9NR56 388 aaKnown RBP16.95■□□□□ 0.3
COL7A1-202ENST00000422991 RAD18Q9NS91 495 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 SYBUQ9NX95 663 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 PILRBQ9UKJ0 227 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 PKP3Q9Y446 797 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 TCAF1Q9Y4C2 921 aa16.95■□□□□ 0.3
COL7A1-202ENST00000422991 GVINP1Q7Z2Y8 2422 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 STX7O15400 261 aaKnown RBP16.94■□□□□ 0.3
COL7A1-202ENST00000422991 PPFIA2O75334 1257 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 ADRA1DP25100 572 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 PSMA3P25788 255 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 HOXD12P35452 270 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 DPP6P42658 865 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 DPTQ07507 201 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 LAMB3Q13751 1172 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 PTPRCAPQ14761 206 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 PCID2Q5JVF3 399 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 FNBP1LQ5T0N5 605 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 HENMT1Q5T8I9 393 aaKnown RBP16.94■□□□□ 0.3
COL7A1-202ENST00000422991 ARMC3Q5W041 872 aa16.94■□□□□ 0.3
COL7A1-202ENST00000422991 ESRP1Q6NXG1 681 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms