RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 LHX6Q9UPM6 363 aa8.64□□□□□ -1.03
MDC1-204ENST00000422266 RAXQ9Y2V3 346 aa8.64□□□□□ -1.03
MDC1-204ENST00000422266 PCDHGA8Q9Y5G5 932 aa8.64□□□□□ -1.03
MDC1-204ENST00000422266 HEY1Q9Y5J3 304 aa8.64□□□□□ -1.03
MDC1-204ENST00000422266 U3KQA8 63 aa8.64□□□□□ -1.03
MDC1-204ENST00000422266 ASPMQ8IZT6 3477 aa8.64□□□□□ -1.03
MDC1-204ENST00000422266 USP24Q9UPU5 2620 aa8.64□□□□□ -1.03
MDC1-204ENST00000422266 IGF2RP11717 2491 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 KMT2BQ9UMN6 2715 aaPredicted RBP8.63□□□□□ -1.03
MDC1-204ENST00000422266 TMEM202A6NGA9 273 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 CAPN8A6NHC0 703 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 NPIPB15A6NHN6 443 aaPredicted RBP8.63□□□□□ -1.03
MDC1-204ENST00000422266 A8MX80 341 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 GOLGA6L6A8MZA4 724 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 ANKRD66B4E2M5 251 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 GPR89AB7ZAQ6 455 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 NUDT21O43809 227 aaKnown RBP8.63□□□□□ -1.03
MDC1-204ENST00000422266 USP12O75317 370 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.03
MDC1-204ENST00000422266 LCA5LO95447 670 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 JCHAINP01591 159 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 IVLP07476 585 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 GPR89BP0CG08 455 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 ETV3P41162 512 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 PCBP4P57723 403 aaKnown RBP8.63□□□□□ -1.03
MDC1-204ENST00000422266 COPS2P61201 443 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 DSC2Q02487 901 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 GBE1Q04446 702 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 ISXQ2M1V0 245 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 TFDP3Q5H9I0 405 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 ZDHHC20Q5W0Z9 365 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 LRRC66Q68CR7 880 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 DENND2CQ68D51 928 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 PDPK2PQ6A1A2 396 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 OGFOD3Q6PK18 319 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 Q6ZVL8 140 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 HEATR4Q86WZ0 1026 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 RFX6Q8HWS3 928 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 TMTC1Q8IUR5 882 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 RCOR2Q8IZ40 523 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 PQLC3Q8N755 202 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 PLD5Q8N7P1 536 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 AVL9Q8NBF6 648 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 PLA2G15Q8NCC3 412 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 GPR156Q8NFN8 814 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 WDR36Q8NI36 951 aaKnown RBP8.63□□□□□ -1.03
MDC1-204ENST00000422266 UBE2Q2Q8WVN8 375 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 P3H4Q92791 437 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 LRRC45Q96CN5 670 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 AP2M1Q96CW1 435 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 PDXPQ96GD0 296 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 MRFAP1L1Q96HT8 127 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 HIC2Q96JB3 615 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 GFM1Q96RP9 751 aaKnown RBP8.63□□□□□ -1.03
MDC1-204ENST00000422266 DPYSL5Q9BPU6 564 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 CCDC3Q9BQI4 270 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 TCEAL2Q9H3H9 227 aaPredicted RBP8.63□□□□□ -1.03
MDC1-204ENST00000422266 RMI1Q9H9A7 625 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 CARS2Q9HA77 564 aaKnown RBP8.63□□□□□ -1.03
MDC1-204ENST00000422266 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.63□□□□□ -1.03
MDC1-204ENST00000422266 AKAP7Q9P0M2 348 aaPredicted RBP8.63□□□□□ -1.03
MDC1-204ENST00000422266 CHKBQ9Y259 395 aa8.63□□□□□ -1.03
MDC1-204ENST00000422266 ANKRD36A6QL64 1941 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 APC2O95996 2303 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 CCDC187A0A096LP49 1063 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 C1orf232A0A0U1RR37 186 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 HACD1B0YJ81 288 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 NTN3O00634 580 aaPredicted RBP8.62□□□□□ -1.03
MDC1-204ENST00000422266 BRINP1O60477 761 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 HLA-DQB2P05538 268 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 SLC2A4P14672 509 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 COMTP21964 271 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 LHCGRP22888 699 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 EIF2S3P41091 472 aaKnown RBP8.62□□□□□ -1.03
MDC1-204ENST00000422266 GPR3P46089 330 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 STC1P52823 247 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 GABREP78334 506 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 PTSQ03393 145 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 C14orf28Q4W4Y0 310 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 TEX44Q53QW1 395 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 CERCAMQ5T4B2 595 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 C11orf63Q6NUN7 778 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 CRTC1Q6UUV9 634 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 HSD11B1LQ7Z5J1 315 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 TECPR1Q7Z6L1 1165 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 KATNAL2Q8IYT4 538 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 TC2NQ8N9U0 490 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 ARRDC2Q8TBH0 407 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 GPBAR1Q8TDU6 330 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 TFB1MQ8WVM0 346 aaKnown RBP8.62□□□□□ -1.03
MDC1-204ENST00000422266 OR1E3Q8WZA6 343 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 HAUS1Q96CS2 278 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 LIN37Q96GY3 246 aaPredicted RBP8.62□□□□□ -1.03
MDC1-204ENST00000422266 OLFM3Q96PB7 478 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 PPP1R2P1Q96PQ5 205 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 LGMNQ99538 433 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 FRMD8Q9BZ67 464 aaPredicted RBP8.62□□□□□ -1.03
MDC1-204ENST00000422266 DPH1Q9BZG8 443 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 TMEM168Q9H0V1 697 aa8.62□□□□□ -1.03
MDC1-204ENST00000422266 RBSNQ9H1K0 784 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms