RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 WDR26Q9H7D7 661 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 POLR1BQ9H9Y6 1135 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 CD207Q9UJ71 328 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 B2RBV5 119 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 E9PBE3 544 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SLC28A1O00337 649 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TRAFD1O14545 582 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-206ENST00000421141 KLHL41O60662 606 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 ULK1O75385 1050 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 CNMDO75829 334 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 VNN1O95497 513 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 AP2A1O95782 977 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF852Q6ZMS4 543 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 AMZ2Q86W34 360 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 PHACTR1Q9C0D0 580 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SYBUQ9NX95 663 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 CA14Q9ULX7 337 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 AP3M1Q9Y2T2 418 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 LEFTY2O00292 366 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TAF1AQ15573 450 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-206ENST00000421141 CMTM8Q8IZV2 173 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 PROX1Q92786 737 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SHANK3Q9BYB0 1731 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 LMAN2LQ9H0V9 348 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SPATS2LQ9NUQ6 558 aaKnown RBP10.73□□□□□ -0.69
PTCH1-206ENST00000421141 DMAC2Q9NW81 257 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SLC12A4Q9UP95 1085 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 C16orf96A6NNT2 1141 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 BGNP21810 368 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 JAK1P23458 1154 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 S100A3P33764 101 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 NSG1P42857 185 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 POLD2P49005 469 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF544Q6NX49 715 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TCP10LQ8TDR4 215 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 INPP5DQ92835 1189 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF599Q96NL3 588 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SLC2A4RGQ9NR83 387 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TFEBP19484 476 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 DSC2Q02487 901 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 STX4Q12846 297 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 GKN2Q86XP6 184 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 FAM126BQ8IXS8 530 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 MDM1Q8TC05 714 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TOX2Q96NM4 488 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 NDUFAF1Q9Y375 327 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 EPHB6O15197 1021 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 EPORP19235 508 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SCNN1AP37088 669 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 HNRNPDQ14103 355 aaKnown RBP10.73□□□□□ -0.69
PTCH1-206ENST00000421141 CRYMQ14894 314 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TMPRSS11BQ86T26 416 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 LONP2Q86WA8 852 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 PCDH20Q8N6Y1 951 aaKnown RBP10.73□□□□□ -0.69
PTCH1-206ENST00000421141 PLD5Q8N7P1 536 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 HEY2Q9UBP5 337 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 OR6A2O95222 327 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 HGFP14210 728 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TPSB2P20231 275 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 OXTRP30559 389 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 OVGP1Q12889 678 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TPSAB1Q15661 275 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 CHST15Q7LFX5 561 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF280BQ86YH2 543 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SPATA5L1Q9BVQ7 753 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SRMSQ9H3Y6 488 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TMBIM4Q9HC24 238 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SUCOQ9UBS9 1254 aaKnown RBP10.73□□□□□ -0.69
PTCH1-206ENST00000421141 FAM220BPB1ANY3 271 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF623O75123 536 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 GPD2P43304 727 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 RPS24P62847 133 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 FASTKQ14296 549 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ENPP7Q6UWV6 458 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 GPRIN3Q6ZVF9 776 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ZBTB2Q8N680 514 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 KLK6Q92876 244 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 PCYT2Q99447 389 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ZSCAN5AQ9BUG6 496 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ABCG8Q9H221 673 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 SUV39H2Q9H5I1 410 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 BCAS3Q9H6U6 928 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 CLDN4O14493 209 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 KCNH1O95259 989 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 CTBP1Q13363 440 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 FRG1Q14331 258 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ANO7Q6IWH7 933 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 C16orf62Q7Z3J2 963 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 HERC2P3Q9BVR0 1158 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 SCN3BQ9NY72 215 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 FNIP2Q9P278 1114 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 CORO1CQ9ULV4 474 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 FOXM1Q08050 763 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 SNX30Q5VWJ9 437 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ZSCAN1Q8NBB4 408 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 TPD52L3Q96J77 140 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 APOBEC3GQ9HC16 384 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 NINJ2Q9NZG7 142 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 TMEM216Q9P0N5 145 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 HMGXB4Q9UGU5 601 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms