RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 SYNJ2BP-COX16A0A087WUM0 186 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 E5RJQ4 531 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 ZNF185O15231 689 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 HSF2BPO75031 334 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 RECQL5O94762 991 aaPredicted RBP8.97□□□□□ -0.97
TRIM39-206ENST00000420746 C9P02748 559 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 ALPPP05187 535 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 C8BP07358 591 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 IVLP07476 585 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 FOSL1P15407 271 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 NR2F2P24468 414 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 ADCY8P40145 1251 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 ACTR1BP42025 376 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 ACTR1AP61163 376 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 RPS18P62269 152 aaKnown RBP8.97□□□□□ -0.97
TRIM39-206ENST00000420746 HHEXQ03014 270 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 STK4Q13043 487 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 GRM3Q14832 879 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 SLC39A14Q15043 492 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 PNCKQ6P2M8 343 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 MTFR2Q6P444 385 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 ZNF517Q6ZMY9 492 aaPredicted RBP8.97□□□□□ -0.97
TRIM39-206ENST00000420746 TAOK1Q7L7X3 1001 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 PPP1R3BQ86XI6 285 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 TGIF2LYQ8IUE0 185 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 PARP9Q8IXQ6 854 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 DEFB106AQ8N104 65 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 CHDHQ8NE62 594 aaPredicted RBP8.97□□□□□ -0.97
TRIM39-206ENST00000420746 COG1Q8WTW3 980 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 CASKIN2Q8WXE0 1202 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 DHX58Q96C10 678 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 C9orf72Q96LT7 481 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.97□□□□□ -0.97
TRIM39-206ENST00000420746 TTYH3Q9C0H2 523 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 RETREG1Q9H6L5 497 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 PHPT1Q9NRX4 125 aaPredicted RBP8.97□□□□□ -0.97
TRIM39-206ENST00000420746 MPP6Q9NZW5 540 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 COX16Q9P0S2 106 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 SUCOQ9UBS9 1254 aaKnown RBP8.97□□□□□ -0.97
TRIM39-206ENST00000420746 SUFUQ9UMX1 484 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 FARSAQ9Y285 508 aaKnown RBP8.97□□□□□ -0.97
TRIM39-206ENST00000420746 PLEKHM1Q9Y4G2 1056 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 ACTL7AQ9Y615 435 aa8.97□□□□□ -0.97
TRIM39-206ENST00000420746 STAB1Q9NY15 2570 aa8.96□□□□□ -0.97
TRIM39-206ENST00000420746 IPO13O94829 963 aaKnown RBP8.96□□□□□ -0.98
TRIM39-206ENST00000420746 IGSF6O95976 241 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 FUCA1P04066 466 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 BRD2P25440 801 aaKnown RBP8.96□□□□□ -0.98
TRIM39-206ENST00000420746 RPL13P26373 211 aaKnown RBP8.96□□□□□ -0.98
TRIM39-206ENST00000420746 GNPDA1P46926 289 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 GLRBP48167 497 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 VAV2P52735 878 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 NME3Q13232 169 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 LRP8Q14114 963 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 ARTNQ5T4W7 220 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 IZUMO3Q5VZ72 239 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 FCRL6Q6DN72 434 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 BRAT1Q6PJG6 821 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 MRGPRGQ86SM5 289 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 CUZD1Q86UP6 607 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 BPHLQ86WA6 291 aaPredicted RBP8.96□□□□□ -0.98
TRIM39-206ENST00000420746 ZNF761Q86XN6 746 aaPredicted RBP8.96□□□□□ -0.98
TRIM39-206ENST00000420746 ARFGAP1Q8N6T3 406 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 AVL9Q8NBF6 648 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 CHTF18Q8WVB6 975 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 FAR1Q8WVX9 515 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 SCARF2Q96GP6 870 aaPredicted RBP8.96□□□□□ -0.98
TRIM39-206ENST00000420746 RUFY1Q96T51 708 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 MDFIQ99750 246 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 TEX101Q9BY14 249 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 TKTL2Q9H0I9 626 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 BLZF1Q9H2G9 400 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 CXXC4Q9H2H0 198 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 WDCPQ9H6R7 721 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
TRIM39-206ENST00000420746 KCTD5Q9NXV2 234 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 KLHL3Q9UH77 587 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 HPCAL4Q9UM19 191 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 SLC17A4Q9Y2C5 497 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 ATP8A1Q9Y2Q0 1164 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 NBEAL1Q6ZS30 2694 aa8.96□□□□□ -0.98
TRIM39-206ENST00000420746 A0A1W2PQJ5 194 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 LILRA5A6NI73 299 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 A6NL46 340 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 I6L893 689 aaPredicted RBP8.95□□□□□ -0.98
TRIM39-206ENST00000420746 THAP12O43422 761 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 BUB1BO60566 1050 aaPredicted RBP8.95□□□□□ -0.98
TRIM39-206ENST00000420746 F9P00740 461 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 AGAP20933 346 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 TEAD1P28347 426 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 CASP1P29466 404 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 HNRNPH3P31942 346 aaKnown RBP8.95□□□□□ -0.98
TRIM39-206ENST00000420746 CXCR3P49682 368 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 SH3BP2P78314 561 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 PDE1BQ01064 536 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 SRSF11Q05519 484 aaKnown RBP8.95□□□□□ -0.98
TRIM39-206ENST00000420746 CUL4BQ13620 913 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 TAF5Q15542 800 aa8.95□□□□□ -0.98
TRIM39-206ENST00000420746 ATXN7L2Q5T6C5 722 aaPredicted RBP8.95□□□□□ -0.98
TRIM39-206ENST00000420746 XKRXQ6PP77 449 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms