RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ADGRE1Q14246 886 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 SPRED3Q2MJR0 410 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 NUDCD3Q8IVD9 361 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 PLPP6Q8IY26 295 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 GPR78Q96P69 363 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 SUV39H2Q9H5I1 410 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 HPS4Q9NQG7 708 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 TLK1Q9UKI8 766 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 STX7O15400 261 aaKnown RBP20.94■□□□□ 0.94
GPC1-202ENST00000420138 BNIP3LO60238 219 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 WISP3O95389 354 aaPredicted RBP20.94■□□□□ 0.94
GPC1-202ENST00000420138 POP4O95707 220 aaKnown RBP20.94■□□□□ 0.94
GPC1-202ENST00000420138 SBK3P0C264 359 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 SP100P23497 879 aaPredicted RBP20.94■□□□□ 0.94
GPC1-202ENST00000420138 ALDH3A1P30838 453 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 CDKN1CP49918 316 aaPredicted RBP20.94■□□□□ 0.94
GPC1-202ENST00000420138 VASPP50552 380 aaPredicted RBP20.94■□□□□ 0.94
GPC1-202ENST00000420138 TIAL1Q01085 375 aaKnown RBP eCLIP20.94■□□□□ 0.94
GPC1-202ENST00000420138 DBN1Q16643 649 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 CTC1Q2NKJ3 1217 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 CCDC153Q494R4 210 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 FASTKD1Q53R41 847 aaKnown RBP20.94■□□□□ 0.94
GPC1-202ENST00000420138 HECTD2Q5U5R9 776 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 VITQ6UXI7 678 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 PIANPQ8IYJ0 282 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 KCTD4Q8WVF5 259 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 S1PR5Q9H228 398 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 KLHL14Q9P2G3 628 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 COPG2Q9UBF2 871 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 CRYL1Q9Y2S2 319 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 ACOT9Q9Y305 439 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 PPIL1Q9Y3C6 166 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 ANKRD36A6QL64 1941 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 CAPN8A6NHC0 703 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 TTC34A8MYJ7 566 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 H0YHG0 523 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 DNAJC6O75061 913 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 NFATC1O95644 943 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 IL1BP01584 269 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 COL6A2P12110 1019 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 SLC6A11P48066 632 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 CDKN2DP55273 166 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 CHI3L2Q15782 390 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 TAF1BQ53T94 588 aaPredicted RBP20.94■□□□□ 0.94
GPC1-202ENST00000420138 LCA5Q86VQ0 697 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 CCDC63Q8NA47 563 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 E2F7Q96AV8 911 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 LYSMD1Q96S90 227 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 ECT2Q9H8V3 914 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 ABCF3Q9NUQ8 709 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 VWA7Q9Y334 891 aa20.94■□□□□ 0.94
GPC1-202ENST00000420138 G3V2L1 256 aa20.93■□□□□ 0.94
GPC1-202ENST00000420138 FGF3P11487 239 aaPredicted RBP20.93■□□□□ 0.94
GPC1-202ENST00000420138 MC4RP32245 332 aa20.93■□□□□ 0.94
GPC1-202ENST00000420138 BST1Q10588 318 aa20.93■□□□□ 0.94
GPC1-202ENST00000420138 RAB3IL1Q8TBN0 382 aa20.93■□□□□ 0.94
GPC1-202ENST00000420138 FAM161BQ96MY7 647 aa20.93■□□□□ 0.94
GPC1-202ENST00000420138 MYADMQ96S97 322 aa20.93■□□□□ 0.94
GPC1-202ENST00000420138 GPR63Q9BZJ6 419 aa20.93■□□□□ 0.94
GPC1-202ENST00000420138 ZDHHC6Q9H6R6 413 aa20.93■□□□□ 0.94
GPC1-202ENST00000420138 NMRAL1Q9HBL8 299 aa20.93■□□□□ 0.94
GPC1-202ENST00000420138 MTF2Q9Y483 593 aaPredicted RBP20.93■□□□□ 0.94
GPC1-202ENST00000420138 PRRT4C9JH25 899 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 GAPDHSO14556 408 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 DLDP09622 509 aaKnown RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 POU3F3P20264 500 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 KCNA4P22459 653 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 FCHO2Q0JRZ9 810 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 PSAPL1Q6NUJ1 521 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 SDCCAG8Q86SQ7 713 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 OR6Y1Q8NGX8 325 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 WFIKKN2Q8TEU8 576 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 SCG3Q8WXD2 468 aaKnown RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 LPGAT1Q92604 370 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 NXPE3Q969Y0 559 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 RIPOR3Q96MK2 946 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 ZNF641Q96N77 438 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 TSSK1BQ9BXA7 367 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 PLA2G2FQ9BZM2 168 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 CIPCQ9C0C6 399 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 C20orf27Q9GZN8 174 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 ZNF395Q9H8N7 513 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 ZFYVE1Q9HBF4 777 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 ZFP14Q9HCL3 533 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 INTS10Q9NVR2 710 aaKnown RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 NPIPB15A6NHN6 443 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 TARM1B6A8C7 271 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 SNNO75324 88 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 CLDN7O95471 211 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 NEFHP12036 1026 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 OCRLQ01968 901 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 PDGFRLQ15198 375 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 TMEM207Q6UWW9 146 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 ZCCHC23Q6ZST2 131 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 C10orf107Q8IVU9 208 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 TRIM42Q8IWZ5 723 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 SPATA6LQ8N4H0 392 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 GBP7Q8N8V2 638 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 NXNL1Q96CM4 212 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 SCRN2Q96FV2 425 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms