RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ARMC12Q5T9G4 340 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 DENND2CQ68D51 928 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 RBM44Q6ZP01 1051 aaKnown RBP11.03□□□□□ -0.64
SSBP3-206ENST00000420121 HEATR4Q86WZ0 1026 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 C17orf82Q86X59 251 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-206ENST00000420121 PAF1Q8N7H5 531 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 CNTD1Q8N815 330 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 KCTD6Q8NC69 237 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 ATL2Q8NHH9 583 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 SLC35G2Q8TBE7 412 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 NSMCE1Q8WV22 266 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 CCDC74AQ96AQ1 378 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 HDAC11Q96DB2 347 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 ZNF578Q96N58 590 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-206ENST00000420121 RNF157Q96PX1 679 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 TDRD1Q9BXT4 1180 aaKnown RBP11.03□□□□□ -0.64
SSBP3-206ENST00000420121 POLR1EQ9GZS1 481 aaKnown RBP11.03□□□□□ -0.64
SSBP3-206ENST00000420121 NHEJ1Q9H9Q4 299 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-206ENST00000420121 CYP4F12Q9HCS2 524 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 GULP1Q9UBP9 304 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 AMACRQ9UHK6 382 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 SATB2Q9UPW6 733 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 ZNF487B1APH4 448 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 TPM3P06753 285 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 CCNB1P14635 433 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 KELP23276 732 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 STC1P52823 247 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 CCL7P80098 99 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 TLE3Q04726 772 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 PPIDQ08752 370 aaKnown RBP11.02□□□□□ -0.65
SSBP3-206ENST00000420121 ZBTB17Q13105 803 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 HLTFQ14527 1009 aaKnown RBP eCLIP11.02□□□□□ -0.65
SSBP3-206ENST00000420121 MESDQ14696 234 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 TCEAL1Q15170 157 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 C3orf38Q5JPI3 329 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 CERCAMQ5T4B2 595 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 LRRC66Q68CR7 880 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 SLC9A4Q6AI14 798 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 TIGD7Q6NT04 549 aaPredicted RBP11.02□□□□□ -0.65
SSBP3-206ENST00000420121 USP45Q70EL2 814 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 B3GNT8Q7Z7M8 397 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 SPACA3Q8IXA5 215 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 RNF214Q8ND24 703 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 WDR48Q8TAF3 677 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 GPBAR1Q8TDU6 330 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 SCG3Q8WXD2 468 aaKnown RBP11.02□□□□□ -0.65
SSBP3-206ENST00000420121 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 SLC46A1Q96NT5 459 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 WDR24Q96S15 920 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 LYSMD1Q96S90 227 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 AGAP2Q99490 1192 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 ABCG8Q9H221 673 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 TSPY26PQ9H489 355 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 SPATS2LQ9NUQ6 558 aaKnown RBP11.02□□□□□ -0.65
SSBP3-206ENST00000420121 RBM22Q9NW64 420 aaKnown RBP eCLIP11.02□□□□□ -0.65
SSBP3-206ENST00000420121 KCTD5Q9NXV2 234 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 CD84Q9UIB8 345 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 LCMT1Q9UIC8 334 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 DOLKQ9UPQ8 538 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 CHKBQ9Y259 395 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 SLC17A4Q9Y2C5 497 aa11.02□□□□□ -0.65
SSBP3-206ENST00000420121 CAPN8A6NHC0 703 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 CDRT15L2A8MXV6 281 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 D6RAR5 112 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 AKR1B10O60218 316 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 POLD2P49005 469 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 PCBP4P57723 403 aaKnown RBP11.01□□□□□ -0.65
SSBP3-206ENST00000420121 ERVPABLB-1P60509 514 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 IFI35P80217 286 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-206ENST00000420121 CCDC173Q0VFZ6 552 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 ARHGEF7Q14155 803 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 SPIDRQ14159 915 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 C14orf28Q4W4Y0 310 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 TMPRSS9Q7Z410 1059 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 TAF8Q7Z7C8 310 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 NLRP8Q86W28 1048 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 VSIG1Q86XK7 387 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 MAP7D3Q8IWC1 876 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 CCDC13Q8IYE1 715 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 LSMEM2Q8N112 164 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
SSBP3-206ENST00000420121 FAM46DQ8NEK8 389 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 SCAMP4Q969E2 229 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 SCARF2Q96GP6 870 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-206ENST00000420121 LIN37Q96GY3 246 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-206ENST00000420121 OLFM3Q96PB7 478 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 LGMNQ99538 433 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 DEF6Q9H4E7 631 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 CARS2Q9HA77 564 aaKnown RBP11.01□□□□□ -0.65
SSBP3-206ENST00000420121 PHPT1Q9NRX4 125 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-206ENST00000420121 APPL1Q9UKG1 709 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 SUFUQ9UMX1 484 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 PCDHGA8Q9Y5G5 932 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 PCYT1BQ9Y5K3 369 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-206ENST00000420121 RNF215Q9Y6U7 377 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 AHCTF1Q8WYP5 2266 aa11.01□□□□□ -0.65
SSBP3-206ENST00000420121 GCN1Q92616 2671 aaKnown RBP11□□□□□ -0.65
SSBP3-206ENST00000420121 CCDC187A0A096LP49 1063 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 LRRD1A4D1F6 860 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms