RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 DENND2CQ68D51 928 aa20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 NLRP8Q86W28 1048 aa20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 OR56A4Q8NGH8 313 aa20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 KIAA1524Q8TCG1 905 aa20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 TFB1MQ8WVM0 346 aaKnown RBP20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 P3H4Q92791 437 aa20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 AGAP2Q99490 1192 aa20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 DUSP23Q9BVJ7 150 aa20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 C10orf88Q9H8K7 445 aa20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 MRPL40Q9NQ50 206 aaKnown RBP20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 ADGRG1Q9Y653 693 aa20.59■□□□□ 0.89
PKNOX1-202ENST00000418336 SCN8AQ9UQD0 1980 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 FAM149AA5PLN7 773 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 NEMP2A6NFY4 417 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 IPO7O95373 1038 aaKnown RBP20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 CLDN7O95471 211 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 CEACAM5P06731 702 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 ZNF30P17039 623 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 C6orf132Q5T0Z8 1188 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 FAXCQ5TGI0 409 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 ZCCHC8Q6NZY4 707 aaKnown RBP20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 KDELC1Q6UW63 502 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 ZNF765Q7L2R6 523 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 HEATR4Q86WZ0 1026 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 RAVER1Q8IY67 606 aaKnown RBP20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 SCAMP4Q969E2 229 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 FRMD8Q9BZ67 464 aaPredicted RBP20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 WDR26Q9H7D7 661 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 KCTD5Q9NXV2 234 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 SEPT10Q9P0V9 454 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 KLQ9UEF7 1012 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 CD84Q9UIB8 345 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 PACSIN2Q9UNF0 486 aaPredicted RBP20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 ST14Q9Y5Y6 855 aa20.58■□□□□ 0.89
PKNOX1-202ENST00000418336 MACROD2A1Z1Q3 448 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 TNFRSF10CO14798 259 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 CASC3O15234 703 aaKnown RBP20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 RASGRP1O95267 797 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 MYCLP1P12525 358 aaPredicted RBP20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 HTR1BP28222 390 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 RWDD2BP57060 319 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 CDK3Q00526 305 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 GALNT3Q14435 633 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 CCDC157Q569K6 752 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 ODF2Q5BJF6 829 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 CDCP2Q5VXM1 449 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 BZW1Q7L1Q6 419 aaKnown RBP20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 ZC3H18Q86VM9 953 aaKnown RBP20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 TMPRSS12Q86WS5 348 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 HID1Q8IV36 788 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 CCDC50Q8IVM0 306 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 SLC35F3Q8IY50 421 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 ZNF567Q8N184 647 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 PAF1Q8N7H5 531 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 SCARF2Q96GP6 870 aaPredicted RBP20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 OXNAD1Q96HP4 312 aaPredicted RBP20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 OSBPL8Q9BZF1 889 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 SLC13A1Q9BZW2 595 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 USP29Q9HBJ7 922 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 HAUS2Q9NVX0 235 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 CNOT6Q9ULM6 557 aaKnown RBP20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 SLC17A4Q9Y2C5 497 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 KNTC1P50748 2209 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 MYLKQ15746 1914 aa20.57■□□□□ 0.88
PKNOX1-202ENST00000418336 LOC285095A0A1B0GVY8 99 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 EME2A4GXA9 379 aaPredicted RBP20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 HACD1B0YJ81 288 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 TAF4O00268 1085 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 CACNB4O00305 520 aaPredicted RBP20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 ALPPL2P10696 532 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 CDK4P11802 303 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 NFKB1P19838 968 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 CA4P22748 312 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 NFKBIAP25963 317 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 XRCC4Q13426 336 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 ARHGEF7Q14155 803 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 GUSBP11Q6P575 273 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 ADAMTSL4Q6UY14 1074 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 KIAA1328Q86T90 577 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 NRROSQ86YC3 692 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 CACTIN-AS1Q8N1I8 211 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 GALNT15Q8N3T1 639 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 FSTL5Q8N475 847 aaPredicted RBP20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 ACTL9Q8TC94 416 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 HTR3CQ8WXA8 447 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 HES6Q96HZ4 224 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 COX14Q96I36 57 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 ANP32EQ9BTT0 268 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 DNPEPQ9ULA0 475 aa20.56■□□□□ 0.88
PKNOX1-202ENST00000418336 PRSS38A1L453 326 aa20.55■□□□□ 0.88
PKNOX1-202ENST00000418336 FTCDO95954 541 aa20.55■□□□□ 0.88
PKNOX1-202ENST00000418336 GP1BAP07359 652 aa20.55■□□□□ 0.88
PKNOX1-202ENST00000418336 RBL1P28749 1068 aa20.55■□□□□ 0.88
PKNOX1-202ENST00000418336 BLKP51451 505 aa20.55■□□□□ 0.88
PKNOX1-202ENST00000418336 EPHB1P54762 984 aa20.55■□□□□ 0.88
PKNOX1-202ENST00000418336 OTUD4Q01804 1114 aaKnown RBP20.55■□□□□ 0.88
PKNOX1-202ENST00000418336 CDK18Q07002 472 aa20.55■□□□□ 0.88
PKNOX1-202ENST00000418336 KIF5AQ12840 1032 aa20.55■□□□□ 0.88
PKNOX1-202ENST00000418336 KLF1Q13351 362 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms