RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CYP3A5P20815 502 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ATP5F1P24539 256 aaPredicted RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ARL2P36404 184 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 GLUD2P49448 558 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CLK3P49761 638 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 IST1P53990 364 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CAPRIN1Q14444 709 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CYHR1Q6ZMK1 362 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 LGI2Q8N0V4 545 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 NAT16Q8N8M0 369 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 POC5Q8NA72 575 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 SMG8Q8ND04 991 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 GLMNQ92990 594 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 AURKBQ96GD4 344 aaPredicted RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 SLIRPQ9GZT3 109 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 EML4Q9HC35 981 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 PCDHB3Q9Y5E6 796 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 PCDHA9Q9Y5H5 950 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 N6AMT1Q9Y5N5 214 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 MN1Q10571 1320 aaPredicted RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 HTTP42858 3142 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 SAGE2PA6NJ88 616 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 TNPO2O14787 897 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 RAD51BO15315 384 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 USP12O75317 370 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 PGK1P00558 417 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 TNNC2P02585 160 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ALDOCP09972 364 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 VDRP11473 427 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CAPN3P20807 821 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ACVR2AP27037 513 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 FOXM1Q08050 763 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 IFRD2Q12894 506 aaPredicted RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 EML3Q32P44 896 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 UGT3A2Q3SY77 523 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 TTC23Q5W5X9 447 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 STEAP3Q658P3 488 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CUZD1Q86UP6 607 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 SVOPQ8N4V2 548 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ANGPTL6Q8NI99 470 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 BPIFB1Q8TDL5 484 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 KHSRPQ92945 711 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 LRRC58Q96CX6 371 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 RPL10LQ96L21 214 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 KCTD15Q96SI1 283 aaPredicted RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 MRPL57Q9BQC6 102 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 NTN4Q9HB63 628 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 FBRSL1Q9HCM7 1045 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 NSMCE4AQ9NXX6 385 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 MAP3K20Q9NYL2 800 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CPSF3Q9UKF6 684 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 SATB2Q9UPW6 733 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 PCDHGB1Q9Y5G3 927 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 USP3Q9Y6I4 520 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF638Q14966 1978 aaKnown RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 UPK1AO00322 258 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ANGPT2O15123 496 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 OGTO15294 1046 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 MFSD11O43934 449 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 MAN1A2O60476 641 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ICMTO60725 284 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 AP2A1O95782 977 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 GSK3BP49841 420 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 RAB10P61026 200 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 TOP3AQ13472 1001 aaPredicted RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ACAP2Q15057 778 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CRY1Q16526 586 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 XKR3Q5GH77 459 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 DESI1Q6ICB0 168 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 PRSS48Q7RTY5 328 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC41A1Q8IVJ1 513 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 SDR16C5Q8N3Y7 309 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 DNERQ8NFT8 737 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 FAR1Q8WVX9 515 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 RASSF5Q8WWW0 418 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 NACC2Q96BF6 587 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 RDH12Q96NR8 316 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CHID1Q9BWS9 393 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ALG2Q9H553 416 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 ANKHQ9HCJ1 492 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CASS4Q9NQ75 786 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 PXMP2Q9NR77 195 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 MAGED2Q9UNF1 606 aaPredicted RBP8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 NEMP2A6NFY4 417 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 EVPLLA8MZ36 301 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 PRSS23O95084 383 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SPNP16150 400 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 ALDH4A1P30038 563 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 P2RX3P56373 397 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 VBP1P61758 197 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF460Q14592 562 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 MEP1AQ16819 746 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CTU2Q2VPK5 515 aaKnown RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 VPS26BQ4G0F5 336 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 FKBP9P1Q75LS8 142 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 DNAAF3Q8N9W5 541 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 TMEM125Q96AQ2 219 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 HEXIM2Q96MH2 286 aaKnown RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF300Q96RE9 604 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms