RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PLCB1Q9NQ66 1216 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 SEPT11Q9NVA2 429 aaKnown RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 DNMT3BQ9UBC3 853 aaKnown RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 DDX20Q9UHI6 824 aaKnown RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 MID2Q9UJV3 735 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 FBXL5Q9UKA1 691 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 DNAJC12Q9UKB3 198 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 MYO6Q9UM54 1294 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 GINS2Q9Y248 185 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 Q9Y3F1 56 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 BZW2Q9Y6E2 419 aaKnown RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 NRCAMQ92823 1304 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 CNTNAP2Q9UHC6 1331 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TANC1Q9C0D5 1861 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 GOLGB1Q14789 3259 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 A0A087WZ62 844 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 A6NNZ2 444 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 EIF3CLB5ME19 914 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 E5RJQ4 531 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 F8VZ95 297 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ACKR2O00590 384 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ADAM10O14672 748 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 SEPT4O43236 478 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 SPRY2O43597 315 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMPRSS11DO60235 418 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 MGEA5O60502 916 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZC3H11AO75152 810 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 GFPT2O94808 682 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 NOL4O94818 638 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 IL18RAPO95256 599 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TNNC2P02585 160 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 PLEKP08567 350 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 KRT5P13647 590 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ACVR2AP27037 513 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ADSSP30520 456 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 NTSR1P30989 418 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 CASQ1P31415 396 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 HNRNPH3P31942 346 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 USP8P40818 1118 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 MAGEA1P43355 309 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ACOT2P49753 483 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 GPC3P51654 580 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 AP3M2P53677 418 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 MFAP3P55082 362 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 NAP1L1P55209 391 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TIRAPP58753 221 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 NLRP11P59045 1033 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 OSTNP61366 133 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 FMO1Q01740 532 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF91Q05481 1191 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 MBTD1Q05BQ5 628 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ENPEPQ07075 957 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 KIF5AQ12840 1032 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRPC3Q13507 836 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 KYAT1Q16773 422 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 DCAF4L1Q3SXM0 396 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF260Q3ZCT1 412 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 EPC2Q52LR7 807 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCDC122Q5T0U0 273 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 RNF220Q5VTB9 566 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 GJB7Q6PEY0 223 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 DARS2Q6PI48 645 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 CATSPER4Q7RTX7 472 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 SRGAP1Q7Z6B7 1085 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 WDR49Q8IV35 697 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 BRSK2Q8IWQ3 736 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 YAF2Q8IY57 180 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 THNSL1Q8IYQ7 743 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 FAM156AQ8NDB6 213 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 FBXL13Q8NEE6 735 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 PARD3BQ8TEW8 1205 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMEM174Q8WUU8 243 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 SECISBP2LQ93073 1101 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 NMD3Q96D46 503 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZBTB10Q96DT7 871 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ANKRD36BP1Q96IX9 119 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 ALS2CR12Q96Q35 445 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 EIF3CQ99613 913 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 MTG1Q9BT17 334 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCDC94Q9BW85 323 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 NFKBIZQ9BYH8 718 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 IFIH1Q9BYX4 1025 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 GCOM2Q9BZD3 368 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIM6Q9C030 488 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMEM117Q9H0C3 514 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 CDT1Q9H211 546 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 HAUS4Q9H6D7 363 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 RPF1Q9H9Y2 349 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 SIX2Q9NPC8 291 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 UBE2TQ9NPD8 197 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 SETD4Q9NVD3 440 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 RAB20Q9NX57 234 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 GJD2Q9UKL4 321 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 G3BP2Q9UN86 482 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIP12Q14669 1992 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 SCN10AQ9Y5Y9 1956 aa3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 TDRD15B5MCY1 1934 aaKnown RBP3.99□□□□□ -1.77
HMGB3P20-201ENST00000417997 UQCRHLA0A096LP55 91 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 MACROD2A1Z1Q3 448 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms