RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 FKBPLQ9UIM3 349 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 APPL1Q9UKG1 709 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 FZD4Q9ULV1 537 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 FNDC3AQ9Y2H6 1198 aaKnown RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 TP53BP1Q12888 1972 aaPredicted RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 THADAQ6YHU6 1953 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 GLYATL1P3A0A0U1RQE8 302 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ZCWPW2A0A1B0GU75 182 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 TLDC2A0PJX2 215 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 CCDC162PA2VCL2 907 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 RGSL1A5PLK6 1076 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 PRR23AA6NEV1 266 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 LRRC72A6NJI9 287 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 CCL22O00626 93 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 RASGRF2O14827 1237 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 WNT9AO14904 365 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 AP1G1O43747 822 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 OPA1O60313 960 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 GOT2P00505 430 aaKnown RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 C1SP09871 688 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 MYZAPP0CAP1 466 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ERVK-10P10266 1014 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 LHCGRP22888 699 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 PMLP29590 882 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 DRD3P35462 400 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 PPARGP37231 505 aaPredicted RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 CXCL12P48061 93 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 LIG3P49916 1009 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 CCR3P51677 355 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 STC1P52823 247 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 METAP1P53582 386 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 PTPN5P54829 565 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 RALGDSQ12967 914 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ITGA9Q13797 1035 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 PTPRCAPQ14761 206 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 PTPRRQ15256 657 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 SMAD1Q15797 465 aaKnown RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 KRT71Q3SY84 523 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 KBTBD12Q3ZCT8 623 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 HSP90AA5PQ58FG0 334 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ZRANB3Q5FWF4 1079 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 AARS2Q5JTZ9 985 aaKnown RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 PIP5KL1Q5T9C9 394 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 LGSNQ5TDP6 509 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 AGBL4Q5VU57 503 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ANO7Q6IWH7 933 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 KIAA1161Q6NSJ0 714 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 MRNIPQ6NTE8 343 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 LIPIQ6XZB0 460 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 MARK2Q7KZI7 788 aaKnown RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 PTAR1Q7Z6K3 402 aaPredicted RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 SDCCAG8Q86SQ7 713 aaPredicted RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 FAM124AQ86V42 546 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 RAVER1Q8IY67 606 aaKnown RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 ZNF687Q8N1G0 1237 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 CBARPQ8N350 705 aaPredicted RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 RIBC1Q8N443 379 aaPredicted RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 OR13J1Q8NGT2 312 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 OR4L1Q8NH43 312 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 HDAC10Q969S8 669 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 VOPP1Q96AW1 172 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 CLDN23Q96B33 292 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 MRRFQ96E11 262 aaKnown RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 NUS1Q96E22 293 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 CDKN2AIPNLQ96HQ2 116 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 PKNOX2Q96KN3 472 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 TBATAQ96M53 351 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ZNF778Q96MU6 729 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ZIM3Q96PE6 472 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 HHIPQ96QV1 700 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 C1QTNF7Q9BXJ2 289 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 FUT8Q9BYC5 575 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ROPN1BQ9BZX4 212 aaPredicted RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 BTBD1Q9H0C5 482 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 CDH19Q9H159 772 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 SLC6A17Q9H1V8 727 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ROPN1Q9HAT0 212 aaPredicted RBP8.39□□□□□ -1.07
RBM39-208ENST00000416108 PREBQ9HCU5 417 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 KCTD5Q9NXV2 234 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 SLC24A2Q9UI40 661 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 RABGEF1Q9UJ41 708 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 CRLS1Q9UJA2 301 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 ITM2BQ9Y287 266 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 KCTD3Q9Y597 815 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 FADS3Q9Y5Q0 445 aa8.39□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3DA0A087WVF3 549 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3IA0A087WXS9 549 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3EA0A087X179 549 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3KA0A087X1G2 549 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 IQANK1A0A1B0GTG1 560 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3FA6NER0 549 aaPredicted RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 FAM47DPA6NHR8 397 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 FAM159BA6NKW6 160 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 TBC1D3LB9A6J9 549 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 H7C0S8 307 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 AREL1O15033 823 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 CD3EAPO15446 510 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 PLRG1O43660 514 aaKnown RBP8.38□□□□□ -1.07
RBM39-208ENST00000416108 MMP20O60882 483 aa8.38□□□□□ -1.07
RBM39-208ENST00000416108 ZNF217O75362 1048 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms