RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 RHOJQ9H4E5 214 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 STN1Q9H668 368 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 OGDHLQ9ULD0 1010 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 SLC9A8Q9Y2E8 581 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 EPN2O95208 641 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 MTHFD1P11586 935 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 UGT1A6P19224 532 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 ADORA2AP29274 412 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 ADRA1BP35368 520 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 MAD2L1Q13257 205 aaPredicted RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 OOSP2Q86WS3 158 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 PLD6Q8N2A8 252 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 CMASQ8NFW8 434 aaPredicted RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 LPPQ93052 612 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 ST6GALNAC4Q9H4F1 302 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 DHX33Q9H6R0 707 aaKnown RBP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 PTTG2Q9NZH5 202 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCN1B-202ENST00000415950 PCDHB12Q9Y5F1 795 aa12.91□□□□□ -0.34
SCN1B-202ENST00000415950 EIF2S1P05198 315 aaKnown RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 GPD2P43304 727 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 SLC26A2P50443 739 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 MTTPP55157 894 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 WNT3AP56704 352 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 PRKG2Q13237 762 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 ADGRE1Q14246 886 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 PGAM4Q8N0Y7 254 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 NRG4Q8WWG1 115 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 FIZ1Q96SL8 496 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 MRPL57Q9BQC6 102 aaKnown RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 PRRG3Q9BZD7 231 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 SOX17Q9H6I2 414 aaPredicted RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 CHD2O14647 1828 aaKnown RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 IDH3BO43837 385 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 SQLEQ14534 574 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 FAM187BQ17R55 369 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 FAM171A1Q5VUB5 890 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 CYP4Z2PQ8N1L4 340 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 PROX1Q92786 737 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 CATSPERZQ9NTU4 200 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 VWA7Q9Y334 891 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 SH3GLB1Q9Y371 365 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 TP73O15350 636 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 EDIL3O43854 480 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 LIMK2P53671 638 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 LCLAT1Q6UWP7 414 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 ZDHHC17Q8IUH5 632 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 ZC3H7AQ8IWR0 971 aaKnown RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 ENDOVQ8N8Q3 282 aaKnown RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 KLHL23Q8NBE8 558 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 SKA1Q96BD8 255 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 NTPCRQ9BSD7 190 aaKnown RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 SSU72Q9NP77 194 aaKnown RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 MKL2Q9ULH7 1088 aa12.9□□□□□ -0.34
SCN1B-202ENST00000415950 SAMHD1Q9Y3Z3 626 aaKnown RBP12.9□□□□□ -0.34
SCN1B-202ENST00000415950 E7ENX8 843 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 IFRD1O00458 451 aaPredicted RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 MAGEB3O15480 346 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 AQP1P29972 269 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 ENTPD1P49961 510 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 TNK2Q07912 1038 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 ZNF280DQ6N043 979 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 PAGE2Q7Z2X7 111 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 KRT73Q86Y46 540 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 CDK20Q8IZL9 346 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 CAMKK1Q8N5S9 505 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 GPR156Q8NFN8 814 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 COL26A1Q96A83 441 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 SMARCD1Q96GM5 515 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 CRISPLD1Q9H336 500 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 KLHL31Q9H511 634 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 TRMT13Q9NUP7 481 aaKnown RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 CMTM6Q9NX76 183 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 RPS6KB2Q9UBS0 482 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 LEF1Q9UJU2 399 aaPredicted RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 IRF6O14896 467 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 AZIN1O14977 448 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 ULK1O75385 1050 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 PSIP1O75475 530 aaKnown RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 YWHAQP27348 245 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 IL12AP29459 219 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 BEX3Q00994 111 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 TRIM32Q13049 653 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 GALNT3Q14435 633 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 LZTR1Q8N653 840 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 BTBD9Q96Q07 612 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 BBS4Q96RK4 519 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 VAT1Q99536 393 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 SEMA3CQ99985 751 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 FANCEQ9HB96 536 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 AMBNQ9NP70 447 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 PCDH12Q9NPG4 1184 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 IKZF3Q9UKT9 509 aa12.89□□□□□ -0.35
SCN1B-202ENST00000415950 CD3EAPO15446 510 aaKnown RBP12.89□□□□□ -0.35
SCN1B-202ENST00000415950 FARP2O94887 1054 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms