RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 PSMD12O00232 456 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 STC2O76061 302 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 KLKB1P03952 638 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 UBTFL6P0CB48 400 aaPredicted RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 ME2P23368 584 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 PAX7P23759 505 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 ALDH7A1P49419 539 aaKnown RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 SUOXP51687 545 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 CDH13P55290 713 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 PTK2BQ14289 1009 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 GEN1Q17RS7 908 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 USP41Q3LFD5 358 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 MMEL1Q495T6 779 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 AGKQ53H12 422 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 KIAA1841Q6NSI8 718 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 C16orf59Q7L2K0 433 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 SLAIN1Q8ND83 568 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 LPCAT1Q8NF37 534 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 OVCA2Q8WZ82 227 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 PPP2R3CQ969Q6 453 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 NSMCE3Q96MG7 304 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 MUC3BQ9H195 1237 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 EBF3Q9H4W6 596 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 RETREG1Q9H6L5 497 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 INTS10Q9NVR2 710 aaKnown RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 TRPM5Q9NZQ8 1165 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 BCAP29Q9UHQ4 241 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 AGO1Q9UL18 857 aaKnown RBP12.35□□□□□ -0.43
UBA3-203ENST00000415609 TET1Q8NFU7 2136 aa12.35□□□□□ -0.43
UBA3-203ENST00000415609 ATP6AP2A0A1C7CYW4 349 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 ILVBLA1L0T0 632 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 H3BMM5 538 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 PQBP1O60828 265 aaKnown RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 NDUFS3O75489 264 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 ATP6AP2O75787 350 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 SRP72O76094 671 aaKnown RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 SIX3O95343 332 aaPredicted RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 LINGO3P0C6S8 592 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 GFAPP14136 432 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 FMO4P31512 558 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 ATXN3P54252 364 aaPredicted RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 MRPS22P82650 360 aaKnown RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 STX5Q13190 355 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 TAF1AQ15573 450 aaPredicted RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 TAF12Q16514 161 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 PFKFB4Q16877 469 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 GRAMD1BQ3KR37 738 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 SFT2D3Q587I9 215 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 RNF219Q5W0B1 726 aaPredicted RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 CRIPAKQ8N1N5 446 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 BHLHE22Q8NFJ8 381 aaPredicted RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 C19orf60Q96EN9 201 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 CEP295NLQ96MC4 621 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 SMIM14Q96QK8 99 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 NR1H4Q96RI1 486 aaPredicted RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 TDRD1Q9BXT4 1180 aaKnown RBP12.34□□□□□ -0.43
UBA3-203ENST00000415609 ADA2Q9NZK5 511 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 CCDC167Q9P0B6 97 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 PSMD13Q9UNM6 376 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 FAM50BQ9Y247 325 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 ANKRD36A6QL64 1941 aa12.34□□□□□ -0.43
UBA3-203ENST00000415609 A0A1B0GVM2 712 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 C2orf81A6NN90 581 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 SUPT3HB4E1H0 165 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 SUPT3HO75486 399 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 SEC24AO95486 1093 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 TCN1P20061 433 aaPredicted RBP12.33□□□□□ -0.43
UBA3-203ENST00000415609 AQP4P55087 323 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 CCL23P55773 120 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 PLD1Q13393 1074 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 CYTH1Q15438 398 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 REP15Q6BDI9 236 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 KLHDC10Q6PID8 442 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 CHST9Q7L1S5 443 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 PQLC1Q8N2U9 271 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 PCDH20Q8N6Y1 951 aaKnown RBP12.33□□□□□ -0.43
UBA3-203ENST00000415609 SNX31Q8N9S9 440 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 MDGA1Q8NFP4 955 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 HMGCLL1Q8TB92 370 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 LPGAT1Q92604 370 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 GATA6Q92908 595 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 TFB2MQ9H5Q4 396 aaKnown RBP12.33□□□□□ -0.43
UBA3-203ENST00000415609 SYTL2Q9HCH5 934 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 MID1IP1Q9NPA3 183 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 UTP6Q9NYH9 597 aaKnown RBP12.33□□□□□ -0.43
UBA3-203ENST00000415609 TAS2R13Q9NYV9 303 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 FNDC3AQ9Y2H6 1198 aaKnown RBP12.33□□□□□ -0.43
UBA3-203ENST00000415609 ARIH1Q9Y4X5 557 aaPredicted RBP12.33□□□□□ -0.43
UBA3-203ENST00000415609 PCDHGC4Q9Y5F7 938 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 RAI2Q9Y5P3 530 aa12.33□□□□□ -0.43
UBA3-203ENST00000415609 SCN5AQ14524 2016 aa12.33□□□□□ -0.44
UBA3-203ENST00000415609 LRRC14BA6NHZ5 514 aa12.33□□□□□ -0.44
UBA3-203ENST00000415609 CASQ2O14958 399 aaPredicted RBP12.33□□□□□ -0.44
UBA3-203ENST00000415609 HMGA1P17096 107 aaKnown RBP12.33□□□□□ -0.44
UBA3-203ENST00000415609 CR2P20023 1033 aa12.33□□□□□ -0.44
UBA3-203ENST00000415609 STX1BP61266 288 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms