RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 RECQL5O94762 991 aaPredicted RBP20.51■□□□□ 0.87
PTPRU-203ENST00000415600 CYP2A6P11509 494 aaPredicted RBP20.51■□□□□ 0.87
PTPRU-203ENST00000415600 MYF5P13349 255 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 LSSP48449 732 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 KIAA1024LP59773 190 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 SLC10A7Q0GE19 358 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 ACOX1Q15067 660 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 CCDC70Q6NSX1 233 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 MAP7D3Q8IWC1 876 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 UBL4BQ8N7F7 174 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 PDCD6IPQ8WUM4 868 aaKnown RBP20.51■□□□□ 0.87
PTPRU-203ENST00000415600 TCEAL2Q9H3H9 227 aaPredicted RBP20.51■□□□□ 0.87
PTPRU-203ENST00000415600 POLR1BQ9H9Y6 1135 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 DGKBQ9Y6T7 804 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 MYLKQ15746 1914 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 EIF4E1BA6NMX2 242 aaKnown RBP20.51■□□□□ 0.87
PTPRU-203ENST00000415600 PGRMC1O00264 195 aaKnown RBP20.51■□□□□ 0.87
PTPRU-203ENST00000415600 TRAFD1O14545 582 aaPredicted RBP20.51■□□□□ 0.87
PTPRU-203ENST00000415600 HOXC4P09017 264 aaPredicted RBP20.51■□□□□ 0.87
PTPRU-203ENST00000415600 MMP13P45452 471 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 ATRXP46100 2492 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 GABREP78334 506 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 BRD3Q15059 726 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 ALG11Q2TAA5 492 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 LIPIQ6XZB0 460 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 ZSWIM9Q86XI8 627 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 SLC35F3Q8IY50 421 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 TSACCQ96A04 125 aaPredicted RBP20.51■□□□□ 0.87
PTPRU-203ENST00000415600 BTBD6Q96KE9 485 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 WDR26Q9H7D7 661 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 PCDH18Q9HCL0 1135 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 GULP1Q9UBP9 304 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 PHTF1Q9UMS5 762 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 GPR34Q9UPC5 381 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 PCDHB1Q9Y5F3 818 aa20.51■□□□□ 0.87
PTPRU-203ENST00000415600 CCDC66A2RUB6 948 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 CCDC151A5D8V7 595 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 TNFRSF10CO14798 259 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 CPP00450 1065 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 PRKCGP05129 697 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 CTNNA1P35221 906 aaKnown RBP20.5■□□□□ 0.87
PTPRU-203ENST00000415600 SLC1A1P43005 524 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 PCBP4P57723 403 aaKnown RBP20.5■□□□□ 0.87
PTPRU-203ENST00000415600 SLC25A11Q02978 314 aaKnown RBP20.5■□□□□ 0.87
PTPRU-203ENST00000415600 ISXQ2M1V0 245 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 WDR93Q6P2C0 686 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 USP45Q70EL2 814 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 ZNF248Q8NDW4 579 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 OR56A4Q8NGH8 313 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 MGME1Q9BQP7 344 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 THSD1Q9NS62 852 aa20.5■□□□□ 0.87
PTPRU-203ENST00000415600 ITPR1Q14643 2758 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 TMX2-CTNND1H3BSU7 103 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 HTRA2O43464 458 aaPredicted RBP20.49■□□□□ 0.87
PTPRU-203ENST00000415600 SPOPO43791 374 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 MAFKO60675 156 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 TGM2P21980 687 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 CES1P23141 567 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 RBMS1P29558 406 aaKnown RBP20.49■□□□□ 0.87
PTPRU-203ENST00000415600 ERVPABLB-1P60509 514 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 RALGDSQ12967 914 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 ARHGEF7Q14155 803 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 SPIDRQ14159 915 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 TIGD7Q6NT04 549 aaPredicted RBP20.49■□□□□ 0.87
PTPRU-203ENST00000415600 PCDH19Q8TAB3 1148 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 ALG3Q92685 438 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 LGMNQ99538 433 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 CLPBQ9H078 707 aa20.49■□□□□ 0.87
PTPRU-203ENST00000415600 TLX3O43711 291 aaPredicted RBP20.48■□□□□ 0.87
PTPRU-203ENST00000415600 DXOO77932 396 aaKnown RBP20.48■□□□□ 0.87
PTPRU-203ENST00000415600 MPOP05164 745 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 KRT7P08729 469 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 CA4P22748 312 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 MCM3P25205 808 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 VIPR1P32241 457 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 PDK2Q15119 407 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 GLE1Q53GS7 698 aaKnown RBP20.48■□□□□ 0.87
PTPRU-203ENST00000415600 ARMC12Q5T9G4 340 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 BROXQ5VW32 411 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 KCTD6Q8NC69 237 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 KRT35Q92764 455 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 NUS1Q96E22 293 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 CAAP1Q9H8G2 361 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 PHPT1Q9NRX4 125 aaPredicted RBP20.48■□□□□ 0.87
PTPRU-203ENST00000415600 ETNK2Q9NVF9 386 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 B4GALT6Q9UBX8 382 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 PCDHGC4Q9Y5F7 938 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 PCDHA3Q9Y5H8 950 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 CELSR3Q9NYQ7 3312 aa20.48■□□□□ 0.87
PTPRU-203ENST00000415600 CCDC188H7C350 402 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 PSMD11O00231 422 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 PROSCO94903 275 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 TCF4P15884 667 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 CR2P20023 1033 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 ITKQ08881 620 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 PEX6Q13608 980 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 ZFYVE27Q5T4F4 411 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 RBM15Q96T37 977 aaKnown RBP eCLIP20.47■□□□□ 0.87
PTPRU-203ENST00000415600 CCDC3Q9BQI4 270 aa20.47■□□□□ 0.87
PTPRU-203ENST00000415600 ZNF670Q9BS34 389 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms