RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 BUD23O43709 281 aaKnown RBP14.23□□□□□ -0.13
SF3B1-204ENST00000414963 C1SP09871 688 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 ACADMP11310 421 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 BPIP17213 487 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 SPINT3P49223 89 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 LIG3P49916 1009 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 CLCN5P51795 746 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 DCDC1P59894 354 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 XIAPP98170 497 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 SEMG2Q02383 582 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 MTAPQ13126 283 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 NAB1Q13506 487 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 PTPRCAPQ14761 206 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 RASA2Q15283 850 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 KLHL38Q2WGJ6 581 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 CWF19L1Q69YN2 538 aaKnown RBP14.23□□□□□ -0.13
SF3B1-204ENST00000414963 CAPN12Q6ZSI9 719 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 CYP2U1Q7Z449 544 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 HSD11B1LQ7Z5J1 315 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 TECPR1Q7Z6L1 1165 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 NLRP8Q86W28 1048 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 CNTN4Q8IWV2 1026 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 NRSN1Q8IZ57 195 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 UNC5BQ8IZJ1 945 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 TSTD1Q8NFU3 115 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 GPR150Q8NGU9 434 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 COQ10AQ96MF6 247 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 PLEKHG4BQ96PX9 1271 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 IL26Q9NPH9 171 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 C20orf96Q9NUD7 363 aaPredicted RBP14.23□□□□□ -0.13
SF3B1-204ENST00000414963 VPS18Q9P253 973 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 EBF1Q9UH73 591 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 APPL1Q9UKG1 709 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 PLAAQ9Y263 795 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 ITM2BQ9Y287 266 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 C10orf142B7Z368 130 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 APBB3O95704 486 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 SHBGP04278 402 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 DCNP07585 359 aaKnown RBP14.22□□□□□ -0.13
SF3B1-204ENST00000414963 ELFN1P0C7U0 828 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 ERVK-10P10266 1014 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 GM2AP17900 193 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 AOC1P19801 751 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 HOXA6P31267 233 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 TPMTP51580 245 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 PRAMEP78395 509 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 AGERQ15109 404 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 KBTBD12Q3ZCT8 623 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 TEDDM1Q5T9Z0 273 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 NEPROQ6NW34 567 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 AFTPHQ6ULP2 937 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 KIAA1324Q6UXG2 1013 aaKnown RBP14.22□□□□□ -0.13
SF3B1-204ENST00000414963 KCNMB4Q86W47 210 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 FLCNQ8NFG4 579 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 OR4L1Q8NH43 312 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 GABPB2Q8TAK5 448 aaPredicted RBP14.22□□□□□ -0.13
SF3B1-204ENST00000414963 UHMK1Q8TAS1 419 aaKnown RBP14.22□□□□□ -0.13
SF3B1-204ENST00000414963 CALML6Q8TD86 181 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 GANCQ8TET4 914 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 HMGB4Q8WW32 186 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 CDKL2Q92772 493 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 PKNOX2Q96KN3 472 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 FAM167BQ9BTA0 163 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 DHRS4Q9BTZ2 278 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 ROPN1BQ9BZX4 212 aaPredicted RBP14.22□□□□□ -0.13
SF3B1-204ENST00000414963 SUDS3Q9H7L9 328 aaPredicted RBP14.22□□□□□ -0.13
SF3B1-204ENST00000414963 ROPN1Q9HAT0 212 aaPredicted RBP14.22□□□□□ -0.13
SF3B1-204ENST00000414963 PREBQ9HCU5 417 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 BPIFA1Q9NP55 256 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 SMYD2Q9NRG4 433 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 KCTD5Q9NXV2 234 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 PKD2L2Q9NZM6 624 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 GGT7Q9UJ14 662 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 ATG2BQ96BY7 2078 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 NCOR1O75376 2440 aa14.22□□□□□ -0.13
SF3B1-204ENST00000414963 TMEM221A6NGB7 291 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 CXorf49A8MYA2 514 aaPredicted RBP14.21□□□□□ -0.13
SF3B1-204ENST00000414963 M0R296 226 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 NEMP1O14524 444 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 GAPDHSO14556 408 aaPredicted RBP14.21□□□□□ -0.13
SF3B1-204ENST00000414963 WNT9AO14904 365 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 GOT2P00505 430 aaKnown RBP14.21□□□□□ -0.13
SF3B1-204ENST00000414963 PDGFBP01127 241 aaPredicted RBP14.21□□□□□ -0.13
SF3B1-204ENST00000414963 OXTRP30559 389 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 SPAM1P38567 509 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 CXCL12P48061 93 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 CCR3P51677 355 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 ADPRHP54922 357 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 TMPRSS15P98073 1019 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 PEX6Q13608 980 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 THOC5Q13769 683 aaKnown RBP14.21□□□□□ -0.13
SF3B1-204ENST00000414963 MAP7D1Q3KQU3 841 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 HSP90AA5PQ58FG0 334 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 KIAA0408Q6ZU52 694 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 Q6ZVL8 140 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 MARK2Q7KZI7 788 aaKnown RBP14.21□□□□□ -0.13
SF3B1-204ENST00000414963 ZNF765Q7L2R6 523 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 GALNT7Q86SF2 657 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 CROCCP2Q86T23 111 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 SLC26A11Q86WA9 606 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms