RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 MAGEB16A2A368 324 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 HEATR9A2RTY3 570 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 SMIM23A6NLE4 172 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 ERVK-10P10266 1014 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 NTSR1P30989 418 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 SLCO1A2P46721 670 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 ARSDP51689 593 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 TMPRSS15P98073 1019 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 CAMK2GQ13555 558 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-202ENST00000414700 UGP2Q16851 508 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 ZNF805Q5CZA5 627 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 Q6ZS52 159 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 LYSMD3Q7Z3D4 306 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 PNPLA1Q8N8W4 532 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 RPLP0P6Q8NHW5 317 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 RANBP9Q96S59 729 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 OSBPL1AQ9BXW6 950 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 MKRN2Q9H000 416 aaKnown RBP15.53■□□□□ 0.08
SHMT2-202ENST00000414700 MOCS1Q9NZB8 636 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 SNX3O60493 162 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 COL9A1P20849 921 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 GCAP28676 217 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 RPL26P61254 145 aaKnown RBP15.53■□□□□ 0.08
SHMT2-202ENST00000414700 BNIP1Q12981 228 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 TSTD2Q5T7W7 516 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 SLC30A9Q6PML9 568 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 PARS2Q7L3T8 475 aaKnown RBP15.53■□□□□ 0.08
SHMT2-202ENST00000414700 CCNJLQ8IV13 435 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.53■□□□□ 0.08
SHMT2-202ENST00000414700 SPOCK2Q92563 424 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 ARRDC3Q96B67 414 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 LRIG1Q96JA1 1093 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 DNAJC1Q96KC8 554 aaKnown RBP15.53■□□□□ 0.08
SHMT2-202ENST00000414700 GABRG3Q99928 467 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 SLC6A17Q9H1V8 727 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 ACSS3Q9H6R3 686 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 SUDS3Q9H7L9 328 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-202ENST00000414700 CTNNAL1Q9UBT7 734 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 SUN2Q9UH99 717 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 PHTF1Q9UMS5 762 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 RPL26L1Q9UNX3 145 aaKnown RBP15.53■□□□□ 0.08
SHMT2-202ENST00000414700 ZNF711Q9Y462 761 aa15.53■□□□□ 0.08
SHMT2-202ENST00000414700 LRRK1Q38SD2 2015 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 DOCK9Q9BZ29 2069 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 A0A1W2PQF6 199 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 CAPN8A6NHC0 703 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 GOLGA8CPA6NN73 597 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 C16orf96A6NNT2 1141 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 UGT1A9O60656 530 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 ALDH1A2O94788 518 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 CLDN7O95471 211 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 PRNPP04156 253 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 TIMP2P16035 220 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 LHCGRP22888 699 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 PHBP35232 272 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 PSMD8P48556 350 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 RPS6KA3P51812 740 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 TAF11Q15544 211 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 CDKN3Q16667 212 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 SPANXN3Q5MJ09 141 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 BRAT1Q6PJG6 821 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 ZNF687Q8N1G0 1237 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 TTC30BQ8N4P2 665 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 PTCD2Q8WV60 388 aaKnown RBP15.52■□□□□ 0.08
SHMT2-202ENST00000414700 KLHL29Q96CT2 875 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 SCRN2Q96FV2 425 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 CERS2Q96G23 380 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 STMN4Q9H169 189 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-202ENST00000414700 UGT1A7Q9HAW7 530 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 UGT1A10Q9HAW8 530 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 UGT1A8Q9HAW9 530 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 MRM3Q9HC36 420 aaKnown RBP15.52■□□□□ 0.08
SHMT2-202ENST00000414700 MAGEE1Q9HCI5 957 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 BPIFA1Q9NP55 256 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 PPIL1Q9Y3C6 166 aa15.52■□□□□ 0.08
SHMT2-202ENST00000414700 C1orf232A0A0U1RR37 186 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 EXOC1LA0A1B0GW35 172 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 TSPAN11A1L157 253 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 OR51F1A6NGY5 319 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 POC1B-GALNT4F8VUJ3 575 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 NPC1O15118 1278 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 RGS16O15492 202 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 VAPBO95292 243 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 KRT16P08779 473 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 HOXB2P14652 356 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 TSHRP16473 764 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 TARSP26639 723 aaKnown RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 MSH2P43246 934 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 ARCN1P48444 511 aaKnown RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 ZNF140P52738 457 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 COPAP53621 1224 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 TAF1AQ15573 450 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 PDCD2Q16342 344 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 CWF19L1Q69YN2 538 aaKnown RBP15.51■□□□□ 0.07
SHMT2-202ENST00000414700 ZNF852Q6ZMS4 543 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 TTC7BQ86TV6 843 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 TMIEQ8NEW7 156 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 OR4K2Q8NGD2 314 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 MSANTD3Q96H12 275 aa15.51■□□□□ 0.07
SHMT2-202ENST00000414700 NECAB3Q96P71 396 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms