RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 SPP2Q13103 211 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 STX5Q13190 355 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PPIGQ13427 754 aaKnown RBP eCLIP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SEMA5AQ13591 1074 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SLC12A1Q13621 1099 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 DYRK1AQ13627 763 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 CBFBQ13951 182 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 GRM2Q14416 872 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ZNF460Q14592 562 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 MORF4L2Q15014 288 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SF3B4Q15427 424 aaKnown RBP eCLIP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SMAD2Q15796 467 aaKnown RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 CHRNA6Q15825 494 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SGCAQ16586 387 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PARP6Q2NL67 630 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 KLHL40Q2TBA0 621 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 CDONQ4KMG0 1287 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 FAM47AQ5JRC9 791 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 C10orf120Q5SQS8 335 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 FAM69AQ5T7M9 428 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ATAD3BQ5T9A4 648 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 LIN9Q5TKA1 542 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 C12orf60Q5U649 245 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PRAMEF20Q5VT98 475 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 KLHDC7AQ5VTJ3 777 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ARHGEF16Q5VV41 709 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 IL23RQ5VWK5 629 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 DAB2IPQ5VWQ8 1189 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 MFSD14CQ5VZR4 134 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 CES4AQ5XG92 561 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SNRNP48Q6IEG0 339 aaKnown RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 DENND5AQ6IQ26 1287 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ACAD10Q6JQN1 1059 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PMF1Q6P1K2 205 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 FBXO38Q6PIJ6 1188 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SLC36A4Q6YBV0 504 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SZRD1Q7Z422 152 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 RABEPKQ7Z6M1 372 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PLEKHH3Q7Z736 793 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PRPF39Q86UA1 669 aaKnown RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SGMS1Q86VZ5 419 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PLA2G4DQ86XP0 818 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 DIS3L2Q8IYB7 885 aaKnown RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PYROXD2Q8N2H3 581 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 MIER2Q8N344 545 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 MFSD4AQ8N468 514 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 GLB1L3Q8NCI6 653 aaPredicted RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 C1orf162Q8NEQ5 155 aaPredicted RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 OR13C2Q8NGS9 318 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ABHD4Q8TB40 342 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 KLHDC4Q8TBB5 520 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SETD6Q8TBK2 473 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 MAGEC3Q8TD91 643 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 GPBAR1Q8TDU6 330 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ST7LQ8TDW4 575 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ADAMTS15Q8TE58 950 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 HASPINQ8TF76 798 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 NSMCE1Q8WV22 266 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PSPC1Q8WXF1 523 aaKnown RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 RFFLQ8WZ73 363 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 CCDC127Q96BQ5 260 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 NSUN4Q96CB9 384 aaKnown RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 TMEM41AQ96HV5 264 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 HSPA12BQ96MM6 686 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ZNF560Q96MR9 790 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 RAD9AQ99638 391 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PRRX2Q99811 253 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 RSRP1Q9BUV0 290 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 C6orf62Q9GZU0 229 aaPredicted RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 C12orf65Q9H3J6 166 aaKnown RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 TASP1Q9H6P5 420 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 EVA1AQ9H8M9 152 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SP140LQ9H930 580 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 TRPC7Q9HCX4 862 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SLC40A1Q9NP59 571 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 IL1RAPL2Q9NP60 686 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PARD6AQ9NPB6 346 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 SLC35C2Q9NQQ7 365 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 CENPMQ9NSP4 180 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 C20orf96Q9NUD7 363 aaPredicted RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 TBC1D23Q9NUY8 699 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 NDE1Q9NXR1 346 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 TAS2R7Q9NYW3 318 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 VSX1Q9NZR4 365 aaPredicted RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 NDUFA13Q9P0J0 144 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 DNAJB9Q9UBS3 223 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 NDOR1Q9UHB4 597 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 DNAI1Q9UI46 699 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 RALYQ9UKM9 306 aaKnown RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 ITGA11Q9UKX5 1188 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 AGAP1Q9UPQ3 857 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 CLCA2Q9UQC9 943 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 PCDHA11Q9Y5I1 949 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 TNPO3Q9Y5L0 923 aaKnown RBP3.97□□□□□ -1.77
LINC01048-201ENST00000414480 USH1CQ9Y6N9 552 aa3.97□□□□□ -1.77
LINC01048-201ENST00000414480 MAP1BP46821 2468 aaKnown RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 A0A1W2PQ45 241 aaPredicted RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 A0A1W2PQY0 241 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms