RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 MLPHQ9BV36 600 aaPredicted RBP14.8□□□□□ -0.04
LIMS4-201ENST00000413601 ADGRE3Q9BY15 652 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 SLC25A51Q9H1U9 297 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 ABCG8Q9H221 673 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 GLOD4Q9HC38 313 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 FGF22Q9HCT0 170 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 MRPL40Q9NQ50 206 aaKnown RBP14.8□□□□□ -0.04
LIMS4-201ENST00000413601 U3KQA8 63 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 RP1P56715 2156 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 ASXL3Q9C0F0 2248 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 MAP1BP46821 2468 aaKnown RBP14.8□□□□□ -0.04
LIMS4-201ENST00000413601 CHD8Q9HCK8 2581 aa14.8□□□□□ -0.04
LIMS4-201ENST00000413601 ANKRD66B4E2M5 251 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 LMO7DNF2Z398 122 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 ACACBO00763 2458 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 TPP1O14773 563 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 MT-CYBP00156 380 aaPredicted RBP14.79□□□□□ -0.04
LIMS4-201ENST00000413601 TNFP01375 233 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 PROS1P07225 676 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 TPRP12270 2363 aaKnown RBP14.79□□□□□ -0.04
LIMS4-201ENST00000413601 MYCLP1P12525 358 aaPredicted RBP14.79□□□□□ -0.04
LIMS4-201ENST00000413601 STC1P52823 247 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 RWDD2BP57060 319 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 WASHC5Q12768 1159 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 ILKQ13418 452 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 ELOCQ15369 112 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 CDKN3Q16667 212 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 ST3GAL2Q16842 350 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 RAET1GQ6H3X3 334 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 AADACL2Q6P093 401 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 PEX26Q7Z412 305 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 TMPRSS12Q86WS5 348 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 TXLNBQ8N3L3 684 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 ALG3Q92685 438 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 SCAMP4Q969E2 229 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 AP2M1Q96CW1 435 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 TEKT5Q96M29 485 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 TRIB3Q96RU7 358 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 TEX101Q9BY14 249 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 CYP4F12Q9HCS2 524 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 PHPT1Q9NRX4 125 aaPredicted RBP14.79□□□□□ -0.04
LIMS4-201ENST00000413601 MOSPD1Q9UJG1 213 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 AMFRQ9UKV5 643 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 DNPEPQ9ULA0 475 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 DGKBQ9Y6T7 804 aa14.79□□□□□ -0.04
LIMS4-201ENST00000413601 COL27A1Q8IZC6 1860 aaPredicted RBP14.78□□□□□ -0.04
LIMS4-201ENST00000413601 C1orf232A0A0U1RR37 186 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 APOC4-APOC2K7ER74 178 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 PDE2AO00408 941 aaPredicted RBP14.78□□□□□ -0.04
LIMS4-201ENST00000413601 TNFRSF10CO14798 259 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 MTSS1O43312 755 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 APOC2P02655 101 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 PYGMP11217 842 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 KELP23276 732 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 CD68P34810 354 aaPredicted RBP14.78□□□□□ -0.04
LIMS4-201ENST00000413601 DUSP3P51452 185 aaPredicted RBP14.78□□□□□ -0.04
LIMS4-201ENST00000413601 GSDMDP57764 484 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 CDK3Q00526 305 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 DPTQ07507 201 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 C6orf132Q5T0Z8 1188 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 HES3Q5TGS1 186 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 CCDC181Q5TID7 509 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 FSTL5Q8N475 847 aaPredicted RBP14.78□□□□□ -0.04
LIMS4-201ENST00000413601 TADA1Q96BN2 335 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 QKIQ96PU8 341 aaKnown RBP eCLIP14.78□□□□□ -0.04
LIMS4-201ENST00000413601 LYSMD1Q96S90 227 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 BOCQ9BWV1 1114 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 OSBPL8Q9BZF1 889 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 C10orf88Q9H8K7 445 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 USP29Q9HBJ7 922 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 UBP1Q9NZI7 540 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 PACSIN2Q9UNF0 486 aaPredicted RBP14.78□□□□□ -0.04
LIMS4-201ENST00000413601 DOLKQ9UPQ8 538 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 EFR3BQ9Y2G0 817 aa14.78□□□□□ -0.04
LIMS4-201ENST00000413601 FRYQ5TBA9 3013 aa14.77□□□□□ -0.04
LIMS4-201ENST00000413601 PRSS38A1L453 326 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 CPED1A4D0V7 1026 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 HACD1B0YJ81 288 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 F5H423 210 aaPredicted RBP14.77□□□□□ -0.05
LIMS4-201ENST00000413601 H7C0C1 242 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 PMPCBO75439 489 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 FTCDO95954 541 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 SOD1P00441 154 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 PIRTP0C851 137 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 JUPP14923 745 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 NFKB1P19838 968 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 PTPN7P35236 360 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 GPR1P46091 355 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 ATP5OP48047 213 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 E2F1Q01094 437 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 INSM1Q01101 510 aaPredicted RBP14.77□□□□□ -0.05
LIMS4-201ENST00000413601 OTUD4Q01804 1114 aaKnown RBP14.77□□□□□ -0.05
LIMS4-201ENST00000413601 CDK18Q07002 472 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 XRCC4Q13426 336 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 NOMO1Q15155 1222 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 GUSBP11Q6P575 273 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 PID1Q7Z2X4 250 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 LYSMD3Q7Z3D4 306 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 GKN2Q86XP6 184 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 SLC35F3Q8IY50 421 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms