RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 ZNF512Q96ME7 567 aaPredicted RBP13.04□□□□□ -0.32
LITAF-203ENST00000413364 MARCOQ9UEW3 520 aaPredicted RBP13.04□□□□□ -0.32
LITAF-203ENST00000413364 AFF4Q9UHB7 1163 aaKnown RBP13.04□□□□□ -0.32
LITAF-203ENST00000413364 TLK1Q9UKI8 766 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 TMA7Q9Y2S6 64 aaKnown RBP13.04□□□□□ -0.32
LITAF-203ENST00000413364 ZNF840PA6NDX5 716 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 LYPLA1O75608 230 aaPredicted RBP13.03□□□□□ -0.32
LITAF-203ENST00000413364 CIB2O75838 187 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 ATP5BP06576 529 aaKnown RBP13.03□□□□□ -0.32
LITAF-203ENST00000413364 KITP10721 976 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 CHRNB1P11230 501 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 RALBP11234 206 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 ESRRAP11474 423 aaPredicted RBP13.03□□□□□ -0.32
LITAF-203ENST00000413364 ACVRL1P37023 503 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 NR1H2P55055 460 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 TLE2Q04725 743 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 IHHQ14623 411 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 USP10Q14694 798 aaKnown RBP13.03□□□□□ -0.32
LITAF-203ENST00000413364 PHKG1Q16816 387 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 TMCO4Q5TGY1 634 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 KIAA1841Q6NSI8 718 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 ITIH5Q86UX2 942 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 DENND6AQ8IWF6 608 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 SIX5Q8N196 739 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 ARRDC2Q8TBH0 407 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 PTCD3Q96EY7 689 aaKnown RBP13.03□□□□□ -0.32
LITAF-203ENST00000413364 TOX2Q96NM4 488 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 CLSTN3Q9BQT9 956 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 C2orf49Q9BVC5 232 aaPredicted RBP13.03□□□□□ -0.32
LITAF-203ENST00000413364 Q9H521 79 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 NMRAL1Q9HBL8 299 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 PALMDQ9NP74 551 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 ARL8BQ9NVJ2 186 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 RSL24D1Q9UHA3 163 aaKnown RBP13.03□□□□□ -0.32
LITAF-203ENST00000413364 DNAJC16Q9Y2G8 782 aa13.03□□□□□ -0.32
LITAF-203ENST00000413364 C15orf38-AP3S2A0A0A6YYH1 394 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 G3V2L1 256 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 SEC24AO95486 1093 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 APOA4P06727 396 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 CDH2P19022 906 aaPredicted RBP13.02□□□□□ -0.32
LITAF-203ENST00000413364 DNAJB1P25685 340 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 SLC11A2P49281 568 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 MPP1Q00013 466 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 KCNC4Q03721 635 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 CTBP1Q13363 440 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 IKBKEQ14164 716 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 TRIM60Q495X7 471 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 HECTD3Q5T447 861 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 CNKSR3Q6P9H4 555 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 ARPINQ7Z6K5 226 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 ALYREFQ86V81 257 aaKnown RBP13.02□□□□□ -0.32
LITAF-203ENST00000413364 TNS4Q8IZW8 715 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 C2CD4AQ8NCU7 369 aaPredicted RBP13.02□□□□□ -0.32
LITAF-203ENST00000413364 GABPB2Q8TAK5 448 aaPredicted RBP13.02□□□□□ -0.32
LITAF-203ENST00000413364 SUN5Q8TC36 379 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 PIWIL2Q8TC59 973 aaKnown RBP13.02□□□□□ -0.32
LITAF-203ENST00000413364 CALML6Q8TD86 181 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 PRR11Q96HE9 360 aaPredicted RBP13.02□□□□□ -0.32
LITAF-203ENST00000413364 C1QTNF1Q9BXJ1 281 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 NMUR2Q9GZQ4 415 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 TRNAU1APQ9NX07 287 aaKnown RBP13.02□□□□□ -0.32
LITAF-203ENST00000413364 MID2Q9UJV3 735 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 PADI4Q9UM07 663 aa13.02□□□□□ -0.32
LITAF-203ENST00000413364 MICAL3Q7RTP6 2002 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 BUD23O43709 281 aaKnown RBP13.02□□□□□ -0.33
LITAF-203ENST00000413364 PAPSS2O95340 614 aaPredicted RBP13.02□□□□□ -0.33
LITAF-203ENST00000413364 TNFAIP8O95379 198 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 KRT75O95678 551 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 HMGA1P17096 107 aaKnown RBP13.02□□□□□ -0.33
LITAF-203ENST00000413364 SLC6A4P31645 630 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 ETFBP38117 255 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 SLC1A2P43004 574 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 HARS2P49590 506 aaKnown RBP13.02□□□□□ -0.33
LITAF-203ENST00000413364 ABCE1P61221 599 aaKnown RBP13.02□□□□□ -0.33
LITAF-203ENST00000413364 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 ZNF829Q3KNS6 432 aaPredicted RBP13.02□□□□□ -0.33
LITAF-203ENST00000413364 TSTD2Q5T7W7 516 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 ZNF470Q6ECI4 717 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 RAPH1Q70E73 1250 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 TTC7BQ86TV6 843 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 SLC41A1Q8IVJ1 513 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 PPP4R1Q8TF05 950 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 ZNF599Q96NL3 588 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 SORT1Q99523 831 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 OLFM1Q99784 485 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 EHD1Q9H4M9 534 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 FBXO5Q9UKT4 447 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 LZTS1Q9Y250 596 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 MYLKQ15746 1914 aa13.02□□□□□ -0.33
LITAF-203ENST00000413364 LOC285095A0A1B0GVY8 99 aa13.01□□□□□ -0.33
LITAF-203ENST00000413364 COCHO43405 550 aa13.01□□□□□ -0.33
LITAF-203ENST00000413364 IDH3BO43837 385 aa13.01□□□□□ -0.33
LITAF-203ENST00000413364 H2AFYO75367 372 aaKnown RBP13.01□□□□□ -0.33
LITAF-203ENST00000413364 ABLIM3O94929 683 aa13.01□□□□□ -0.33
LITAF-203ENST00000413364 GJB5O95377 273 aa13.01□□□□□ -0.33
LITAF-203ENST00000413364 SLC35E2BP0CK96 405 aa13.01□□□□□ -0.33
LITAF-203ENST00000413364 PRKACBP22694 351 aa13.01□□□□□ -0.33
LITAF-203ENST00000413364 HTRA3P83110 453 aa13.01□□□□□ -0.33
LITAF-203ENST00000413364 SLC12A1Q13621 1099 aa13.01□□□□□ -0.33
LITAF-203ENST00000413364 TPGS2Q68CL5 300 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms