RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 NPWQ8N729 165 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 SPOCK2Q92563 424 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 ART4Q93070 314 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 ZNF599Q96NL3 588 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 KCTD15Q96SI1 283 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-220ENST00000411464 DPYSL5Q9BPU6 564 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 SNRNP25Q9BV90 132 aaKnown RBP16.69■□□□□ 0.26
MRPL55-220ENST00000411464 FRMD8Q9BZ67 464 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-220ENST00000411464 ASPSCR1Q9BZE9 553 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 CDH19Q9H159 772 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 SLC39A1Q9NY26 324 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 LGALS16A8MUM7 142 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 HTRA2O43464 458 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-220ENST00000411464 SOCS5O75159 536 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 CPP00450 1065 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 FERP16591 822 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 TNFAIP3P21580 790 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 UGT1A3P35503 534 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 ADCY8P40145 1251 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 ETV3P41162 512 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 HCAR3P49019 387 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 PPM1FP49593 454 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-220ENST00000411464 ZNF135P52742 658 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-220ENST00000411464 SQSTM1Q13501 440 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 RAET1GQ6H3X3 334 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 HSD11B1LQ7Z5J1 315 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 CACNA2D3Q8IZS8 1091 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 NAGSQ8N159 534 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 PATE1Q8WXA2 126 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 DTD2Q96FN9 168 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 NSMCE3Q96MG7 304 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 DDA1Q9BW61 102 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 KCNK4Q9NYG8 393 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 PHTF1Q9UMS5 762 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 B3GALT1Q9Y5Z6 326 aa16.68■□□□□ 0.26
MRPL55-220ENST00000411464 UBR5O95071 2799 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-220ENST00000411464 IGHV1OR21-1A0A087WYE8 117 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 TMCO5BA8MYB1 307 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 PPM1DO15297 605 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 IVLP07476 585 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 LIFP15018 202 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 MPSTP25325 297 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 HSPA9P38646 679 aaKnown RBP16.67■□□□□ 0.26
MRPL55-220ENST00000411464 ACTR1BP42025 376 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 CCR10P46092 362 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 POLD2P49005 469 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 ARSDP51689 593 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 POLE2P56282 527 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 ACTR1AP61163 376 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 KCNAB2Q13303 367 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 DCAF12Q5T6F0 453 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 DOK6Q6PKX4 331 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 Q6ZVL8 140 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 FAM129CQ86XR2 697 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 PTRH1Q86Y79 214 aaKnown RBP16.67■□□□□ 0.26
MRPL55-220ENST00000411464 PSTKQ8IV42 348 aaKnown RBP16.67■□□□□ 0.26
MRPL55-220ENST00000411464 CBARPQ8N350 705 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-220ENST00000411464 BBS5Q8N3I7 341 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 ARFGAP1Q8N6T3 406 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 ZNF564Q8TBZ8 553 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-220ENST00000411464 PMEPA1Q969W9 287 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 AHCYL2Q96HN2 611 aaKnown RBP16.67■□□□□ 0.26
MRPL55-220ENST00000411464 NUDCD1Q96RS6 583 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 PEBP4Q96S96 227 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 ZWILCHQ9H900 591 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 NOD2Q9HC29 1040 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 TAS2R14Q9NYV8 317 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 CHMP5Q9NZZ3 219 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 CWC15Q9P013 229 aaKnown RBP16.67■□□□□ 0.26
MRPL55-220ENST00000411464 LIMA1Q9UHB6 759 aaKnown RBP16.67■□□□□ 0.26
MRPL55-220ENST00000411464 SLC17A4Q9Y2C5 497 aa16.67■□□□□ 0.26
MRPL55-220ENST00000411464 COL12A1Q99715 3063 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 UNC13CQ8NB66 2214 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 PSMD11O00231 422 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 THRAP10827 490 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 CDK11BP21127 795 aaKnown RBP16.66■□□□□ 0.26
MRPL55-220ENST00000411464 TEAD1P28347 426 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 MIPP30301 263 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 GPR1P46091 355 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 PLEKHA7Q6IQ23 1121 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 TMEM71Q6P5X7 295 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 USP45Q70EL2 814 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 NAV2Q8IVL1 2488 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 TP53INP2Q8IXH6 220 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 NRSN1Q8IZ57 195 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 PTCD2Q8WV60 388 aaKnown RBP16.66■□□□□ 0.26
MRPL55-220ENST00000411464 SCRN2Q96FV2 425 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 CATSPER2Q96P56 530 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 ERGIC2Q96RQ1 377 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 TUBD1Q9UJT1 453 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 ST14Q9Y5Y6 855 aa16.66■□□□□ 0.26
MRPL55-220ENST00000411464 TMEM191CA6NGB0 347 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 NPIPB15A6NHN6 443 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-220ENST00000411464 EFCAB7A8K855 629 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 ZNF891A8MT65 544 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-220ENST00000411464 B4E171 279 aa16.65■□□□□ 0.26
MRPL55-220ENST00000411464 CAPN5O15484 640 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-220ENST00000411464 ATMINO43313 823 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-220ENST00000411464 RAD1O60671 282 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms