RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 UBXN1Q04323 297 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 SRSF6Q13247 344 aaKnown RBP11.76□□□□□ -0.53
SERF2-210ENST00000409960 MAMLD1Q13495 774 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 SQSTM1Q13501 440 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 ZNF235Q14590 738 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 LBRQ14739 615 aaKnown RBP11.76□□□□□ -0.53
SERF2-210ENST00000409960 C16orf72Q14CZ0 275 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 TBR1Q16650 682 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 AMZ1Q400G9 498 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 NYAP1Q6ZVC0 841 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 TMPRSS9Q7Z410 1059 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 VASH2Q86V25 355 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 HEATR4Q86WZ0 1026 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 ARHGAP12Q8IWW6 846 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 NDUFAF2Q8N183 169 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 AGBL5Q8NDL9 886 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 OR4D9Q8NGE8 314 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 CCL4L1Q8NHW4 92 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
SERF2-210ENST00000409960 DDA1Q9BW61 102 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 ASPSCR1Q9BZE9 553 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 CDH19Q9H159 772 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 RDH14Q9HBH5 336 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 SPATS2LQ9NUQ6 558 aaKnown RBP11.76□□□□□ -0.53
SERF2-210ENST00000409960 FANCLQ9NW38 375 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 TAAR2Q9P1P5 351 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 B4GALT6Q9UBX8 382 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 LIMA1Q9UHB6 759 aaKnown RBP11.76□□□□□ -0.53
SERF2-210ENST00000409960 TUBD1Q9UJT1 453 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 MYO6Q9UM54 1294 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 PHTF1Q9UMS5 762 aa11.76□□□□□ -0.53
SERF2-210ENST00000409960 SDK2Q58EX2 2172 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 IGHV5-10-1A0A0J9YXX1 117 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 LRRC10BA6NIK2 292 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 PYCARD-AS1I3L0S3 204 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 HEXIM1O94992 359 aaKnown RBP11.75□□□□□ -0.53
SERF2-210ENST00000409960 ECEL1O95672 775 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 CPP00450 1065 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 FGF1P05230 155 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 CEACAM5P06731 702 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 PYGLP06737 847 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 IVLP07476 585 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 GM2AP17900 193 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 TNFAIP3P21580 790 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 CSTF2P33240 577 aaKnown RBP eCLIP11.75□□□□□ -0.53
SERF2-210ENST00000409960 MAN1A1P33908 653 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 GNPDA1P46926 289 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 LIMK2P53671 638 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 MAZP56270 477 aaKnown RBP11.75□□□□□ -0.53
SERF2-210ENST00000409960 OR1D5P58170 312 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 RAB15P59190 212 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 GPLD1P80108 840 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 CDK3Q00526 305 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 MYL5Q02045 173 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 OGDHQ02218 1023 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 CNGA3Q16281 694 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 PPP6R3Q5H9R7 873 aaPredicted RBP11.75□□□□□ -0.53
SERF2-210ENST00000409960 PLEKHA7Q6IQ23 1121 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 BORAQ6PGQ7 559 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 ZNF574Q6ZN55 896 aaPredicted RBP11.75□□□□□ -0.53
SERF2-210ENST00000409960 USP45Q70EL2 814 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 IL22RA1Q8N6P7 574 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 PDCD6IPQ8WUM4 868 aaKnown RBP11.75□□□□□ -0.53
SERF2-210ENST00000409960 NSMCE1Q8WV22 266 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 DTD2Q96FN9 168 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 CATSPER2Q96P56 530 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 TEFMQ96QE5 360 aaKnown RBP11.75□□□□□ -0.53
SERF2-210ENST00000409960 NUDCD1Q96RS6 583 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 NUDT22Q9BRQ3 303 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 FRMD8Q9BZ67 464 aaPredicted RBP11.75□□□□□ -0.53
SERF2-210ENST00000409960 GPATCH2LQ9NWQ4 482 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 PCSK1NQ9UHG2 260 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 SUFUQ9UMX1 484 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 SLC17A4Q9Y2C5 497 aa11.75□□□□□ -0.53
SERF2-210ENST00000409960 A8MX80 341 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 B4E171 279 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 AGRPO00253 132 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 CCL4P13236 92 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 CDK11BP21127 795 aaKnown RBP11.74□□□□□ -0.53
SERF2-210ENST00000409960 CD1CP29017 333 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 ARL4AP40617 200 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 TSPAN7P41732 249 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 DPTQ07507 201 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 SLC10A7Q0GE19 358 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 LRP8Q14114 963 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 CA9Q16790 459 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 RAET1GQ6H3X3 334 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 SLC30A9Q6PML9 568 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 NRROSQ86YC3 692 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 SFTPA2Q8IWL1 248 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 NPWQ8N729 165 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 NKD1Q969G9 470 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 SCRN2Q96FV2 425 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 CCDC74BQ96LY2 380 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 KCTD15Q96SI1 283 aaPredicted RBP11.74□□□□□ -0.53
SERF2-210ENST00000409960 MGME1Q9BQP7 344 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 FUCA2Q9BTY2 467 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 EFHD1Q9BUP0 239 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 SLC12A9Q9BXP2 914 aa11.74□□□□□ -0.53
SERF2-210ENST00000409960 TRIM4Q9C037 500 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms