RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RARS2Q5T160 578 aaKnown RBP4.98□□□□□ -1.61
LSM5-205ENST00000409952 KRT39Q6A163 491 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 MOXD1Q6UVY6 613 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 C15orf39Q6ZRI6 1047 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 PPP1R42Q7Z4L9 355 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 ADCK1Q86TW2 530 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 ANKRD13BQ86YJ7 626 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 C1orf210Q8IVY1 113 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 MFN1Q8IWA4 741 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 CCDC13Q8IYE1 715 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 MRPL43Q8N983 215 aaKnown RBP4.98□□□□□ -1.61
LSM5-205ENST00000409952 EXD3Q8N9H8 876 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 KDM1BQ8NB78 822 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 FBXO30Q8TB52 745 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 GRAPLQ8TC17 118 aaPredicted RBP4.98□□□□□ -1.61
LSM5-205ENST00000409952 BCAS4Q8TDM0 211 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 TEKT1Q969V4 418 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 ZNF558Q96NG5 402 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 TEFMQ96QE5 360 aaKnown RBP4.98□□□□□ -1.61
LSM5-205ENST00000409952 PKP4Q99569 1192 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 C1QTNF5Q9BXJ0 243 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 CACNG6Q9BXT2 260 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 TEX101Q9BY14 249 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 ADGRE3Q9BY15 652 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 TRIM2Q9C040 744 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 HSD3B7Q9H2F3 369 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 IARS2Q9NSE4 1012 aaKnown RBP4.98□□□□□ -1.61
LSM5-205ENST00000409952 TMEM74BQ9NUR3 256 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 GRHL1Q9NZI5 618 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 SEPT10Q9P0V9 454 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 FETUBQ9UGM5 382 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 FBXW11Q9UKB1 542 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 CHKBQ9Y259 395 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 EPN1Q9Y6I3 576 aaPredicted RBP4.98□□□□□ -1.61
LSM5-205ENST00000409952 XDHP47989 1333 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ATAD2BQ9ULI0 1458 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 MARCH11A6NNE9 402 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 K7EPI3 171 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 SLC30A4O14863 429 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 AKAP8O43823 692 aaKnown RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 VEGFDO43915 354 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 DAB1O75553 588 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 TJP3O95049 919 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 NXPH3O95157 252 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 RFPL3SP0C7P2 107 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 FAM58BPP0C7Q3 252 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ADRA2CP18825 462 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ANXA7P20073 488 aaKnown RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 DRD4P21917 467 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 GPTP24298 496 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ITPKBP27987 946 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ACADLP28330 430 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 NAGLUP54802 743 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 CLDN2P57739 230 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 SLC26A5P58743 744 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 KIAA1024LP59773 190 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 HMGN5P82970 282 aaKnown RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 PSG6Q00889 435 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 RHAGQ02094 409 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ZBTB16Q05516 673 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 DMWDQ09019 674 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 TOB2Q14106 344 aaPredicted RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 RPS6KA1Q15418 735 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 KRT24Q2M2I5 525 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 PROSER3Q2NL68 480 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 TWISTNBQ3B726 338 aaPredicted RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 CDONQ4KMG0 1287 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ARL13AQ5H913 290 aaPredicted RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 C6orf136Q5SQH8 315 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 FNDC7Q5VTL7 733 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 FAM91A1Q658Y4 838 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 DHRS7BQ6IAN0 325 aaPredicted RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 KDELC1Q6UW63 502 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 Q6ZWC4 215 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 GDF7Q7Z4P5 450 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 SPATA21Q7Z572 469 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ARHGEF25Q86VW2 580 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 TIGD4Q8IY51 512 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 GSPT2Q8IYD1 628 aaKnown RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 MAML2Q8IZL2 1156 aaPredicted RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 RBM15BQ8NDT2 890 aaKnown RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 CNNM3Q8NE01 707 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 RP9Q8TA86 221 aaKnown RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 HES6Q96HZ4 224 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 VPS39Q96JC1 886 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 RMDN2Q96LZ7 410 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ADAD1Q96M93 576 aaKnown RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 FRG2BQ96QU4 278 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 MNTQ99583 582 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 IFT27Q9BW83 186 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ALOXE3Q9BYJ1 711 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 RTN4RQ9BZR6 473 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 TRIM7Q9C029 511 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 TMEM206Q9H813 350 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 DNAJC18Q9H819 358 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 NOL11Q9H8H0 719 aaKnown RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 CNOT10Q9H9A5 744 aaKnown RBP4.97□□□□□ -1.61
LSM5-205ENST00000409952 TXNRD2Q9NNW7 524 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 ZBTB40Q9NUA8 1239 aa4.97□□□□□ -1.61
LSM5-205ENST00000409952 CYP39A1Q9NYL5 469 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms