RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 HIF1AQ16665 826 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 CCDC38Q502W7 563 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 CASC4Q6P4E1 433 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 ZNF765Q7L2R6 523 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 IFT20Q8IY31 132 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 RGL4Q8IZJ4 473 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 PTCD2Q8WV60 388 aaKnown RBP20.59■□□□□ 0.89
C4orf48-202ENST00000409860 EID2BQ96D98 161 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 LENG8Q96PV6 779 aaPredicted RBP20.59■□□□□ 0.89
C4orf48-202ENST00000409860 CDH19Q9H159 772 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 EPC1Q9H2F5 836 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 RRAGDQ9NQL2 400 aaPredicted RBP20.59■□□□□ 0.89
C4orf48-202ENST00000409860 SYBUQ9NX95 663 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 IL17CQ9P0M4 197 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 SAMD15Q9P1V8 674 aa20.59■□□□□ 0.89
C4orf48-202ENST00000409860 EIF2B4Q9UI10 523 aaKnown RBP20.59■□□□□ 0.89
C4orf48-202ENST00000409860 EML5Q05BV3 1969 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 BHMG1C9JSJ3 638 aaPredicted RBP20.58■□□□□ 0.89
C4orf48-202ENST00000409860 PRAMEF26H0Y7S4 382 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 TP73O15350 636 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 BUD23O43709 281 aaKnown RBP20.58■□□□□ 0.89
C4orf48-202ENST00000409860 ZNF140P52738 457 aaPredicted RBP20.58■□□□□ 0.89
C4orf48-202ENST00000409860 TRADDQ15628 312 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 BBS9Q3SYG4 887 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 ZCCHC9Q8N567 271 aaKnown RBP20.58■□□□□ 0.89
C4orf48-202ENST00000409860 OR4K2Q8NGD2 314 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 STYXQ8WUJ0 223 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 DNASE2BQ8WZ79 361 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 SERAC1Q96JX3 654 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 C19orf43Q9BQ61 176 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 MIR1-1HGQ9H1L0 117 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 FAM83DQ9H4H8 585 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 BPIFA1Q9NP55 256 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 FZD3Q9NPG1 666 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 CD84Q9UIB8 345 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 KCTD3Q9Y597 815 aa20.58■□□□□ 0.89
C4orf48-202ENST00000409860 CACNA1HO95180 2353 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 MROH6A6NGR9 719 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 BPIP17213 487 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 SPAM1P38567 509 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 HADHAP40939 763 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 DPP6P42658 865 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 DCDC1P59894 354 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 CRADDP78560 199 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 CUL1Q13616 776 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 IRF4Q15306 451 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 SKIDA1Q1XH10 827 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 FNBP1LQ5T0N5 605 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 ZDHHC24Q6UX98 284 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 RFLNAQ6ZTI6 216 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 TP53I13Q8NBR0 393 aaPredicted RBP20.57■□□□□ 0.88
C4orf48-202ENST00000409860 FBXO25Q8TCJ0 367 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 IFT81Q8WYA0 676 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 AP2M1Q96CW1 435 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 PLEKHG4BQ96PX9 1271 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 MYOCQ99972 504 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 FOXP3Q9BZS1 431 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 ABCG8Q9H221 673 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 EBF2Q9HAK2 575 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 MRM3Q9HC36 420 aaKnown RBP20.57■□□□□ 0.88
C4orf48-202ENST00000409860 GDF3Q9NR23 364 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 NFKBIL1Q9UBC1 381 aaPredicted RBP20.57■□□□□ 0.88
C4orf48-202ENST00000409860 RIMKLBQ9ULI2 386 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 MAD1L1Q9Y6D9 718 aa20.57■□□□□ 0.88
C4orf48-202ENST00000409860 MAGEB16A2A368 324 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 FPGTO14772 594 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 RAD51BO15315 384 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 PCCBP05166 539 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 PYGLP06737 847 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 ITPKAP23677 461 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 MAOBP27338 520 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 DHX9Q08211 1270 aaKnown RBP20.56■□□□□ 0.88
C4orf48-202ENST00000409860 HLTFQ14527 1009 aaKnown RBP eCLIP20.56■□□□□ 0.88
C4orf48-202ENST00000409860 STAT4Q14765 748 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 LPAL2Q16609 132 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 WSCD2Q2TBF2 565 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 TSTD2Q5T7W7 516 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 ALS2CLQ60I27 953 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 CENPUQ71F23 418 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 NLRP8Q86W28 1048 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 MPP5Q8N3R9 675 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 OR13C4Q8NGS5 318 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 PEX13Q92968 403 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 CENPTQ96BT3 561 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 STAMBPL1Q96FJ0 436 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 LOXL4Q96JB6 756 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 DNAJC1Q96KC8 554 aaKnown RBP20.56■□□□□ 0.88
C4orf48-202ENST00000409860 PWWP2AQ96N64 755 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 KLF6Q99612 283 aaPredicted RBP20.56■□□□□ 0.88
C4orf48-202ENST00000409860 ORAI3Q9BRQ5 295 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 KIFC1Q9BW19 673 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 AASDHPPTQ9NRN7 309 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 NLE1Q9NVX2 485 aaPredicted RBP20.56■□□□□ 0.88
C4orf48-202ENST00000409860 MTRF1LQ9UGC7 380 aaKnown RBP20.56■□□□□ 0.88
C4orf48-202ENST00000409860 SUSD2Q9UGT4 822 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 SOX13Q9UN79 622 aa20.56■□□□□ 0.88
C4orf48-202ENST00000409860 SMG5Q9UPR3 1016 aaKnown RBP20.56■□□□□ 0.88
C4orf48-202ENST00000409860 FNDC3AQ9Y2H6 1198 aaKnown RBP20.56■□□□□ 0.88
C4orf48-202ENST00000409860 CCDC78A2IDD5 438 aa20.55■□□□□ 0.88
C4orf48-202ENST00000409860 GNSP15586 552 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms