RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 FICDQ9BVA6 458 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 PNMA8BQ9ULN7 279 aaPredicted RBP22.34■■□□□ 1.17
PTCD3-203ENST00000409783 SHOC2Q9UQ13 582 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 ZNF711Q9Y462 761 aa22.34■■□□□ 1.17
PTCD3-203ENST00000409783 PGRMC1O00264 195 aaKnown RBP22.33■■□□□ 1.17
PTCD3-203ENST00000409783 AURKAO14965 403 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 SOD1P00441 154 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 SDHBP21912 280 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 MSLNQ13421 630 aaPredicted RBP22.33■■□□□ 1.17
PTCD3-203ENST00000409783 PDE1CQ14123 709 aaPredicted RBP22.33■■□□□ 1.17
PTCD3-203ENST00000409783 FAXCQ5TGI0 409 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 DENND5AQ6IQ26 1287 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 ZNF765Q7L2R6 523 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 KANSL1Q7Z3B3 1105 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 TMC3Q7Z5M5 1100 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 PIP4P1Q86T03 277 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 NLRP8Q86W28 1048 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 OXR1Q8N573 874 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 PPP1R2P1Q96PQ5 205 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 RTKNQ9BST9 563 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 ZFYVE1Q9HBF4 777 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 HOMER3Q9NSC5 361 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 CD84Q9UIB8 345 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 OR1A2Q9Y585 309 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 PCDHGB2Q9Y5G2 931 aa22.33■■□□□ 1.17
PTCD3-203ENST00000409783 DCHS1Q96JQ0 3298 aa22.33■■□□□ 1.16
PTCD3-203ENST00000409783 PCDHGA12O60330 932 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 IFNB1P01574 187 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 FGF1P05230 155 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 TCP1P17987 556 aaKnown RBP22.32■■□□□ 1.16
PTCD3-203ENST00000409783 SPINT3P49223 89 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 CCT8P50990 548 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 IL9RQ01113 521 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 EIF2B5Q13144 721 aaKnown RBP22.32■■□□□ 1.16
PTCD3-203ENST00000409783 CYP1B1Q16678 543 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 TTC27Q6P3X3 843 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 NRSN1Q8IZ57 195 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 TTC30BQ8N4P2 665 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 SCAMP4Q969E2 229 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 FUBP1Q96AE4 644 aaKnown RBP22.32■■□□□ 1.16
PTCD3-203ENST00000409783 SRPK1Q96SB4 655 aaKnown RBP22.32■■□□□ 1.16
PTCD3-203ENST00000409783 NAPGQ99747 312 aaPredicted RBP22.32■■□□□ 1.16
PTCD3-203ENST00000409783 APOL2Q9BQE5 337 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 FSD1LQ9BXM9 530 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 AP1M1Q9BXS5 423 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 ARNT2Q9HBZ2 717 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 KLF15Q9UIH9 416 aa22.32■■□□□ 1.16
PTCD3-203ENST00000409783 PCNX2A6NKB5 2137 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 ARID1BQ8NFD5 2236 aaPredicted RBP22.31■■□□□ 1.16
PTCD3-203ENST00000409783 USP12O75317 370 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 HOXC4P09017 264 aaPredicted RBP22.31■■□□□ 1.16
PTCD3-203ENST00000409783 ZSCAN5DPP0CG00 497 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 TEAD1P28347 426 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 EPHA8P29322 1005 aaPredicted RBP22.31■■□□□ 1.16
PTCD3-203ENST00000409783 RPL22P35268 128 aaKnown RBP22.31■■□□□ 1.16
PTCD3-203ENST00000409783 BNIP3Q12983 259 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 SPARCL1Q14515 664 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 MACC1Q6ZN28 852 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 NYAP1Q6ZVC0 841 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 TAB3Q8N5C8 712 aaPredicted RBP22.31■■□□□ 1.16
PTCD3-203ENST00000409783 SAP25Q8TEE9 199 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 NAP1L3Q99457 506 aaPredicted RBP22.31■■□□□ 1.16
PTCD3-203ENST00000409783 AGAP2Q99490 1192 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 ETNK1Q9HBU6 452 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 MYLKQ15746 1914 aa22.31■■□□□ 1.16
PTCD3-203ENST00000409783 RGSL1A5PLK6 1076 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 AP2A1O95782 977 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 TSHRP16473 764 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 ARRB1P49407 418 aaPredicted RBP22.3■■□□□ 1.16
PTCD3-203ENST00000409783 THOP1P52888 689 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 KIAA1024LP59773 190 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 NFATC4Q14934 902 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 ZNF542PQ5EBM4 170 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 HENMT1Q5T8I9 393 aaKnown RBP22.3■■□□□ 1.16
PTCD3-203ENST00000409783 PARGQ86W56 976 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 PDCD7Q8N8D1 485 aaKnown RBP22.3■■□□□ 1.16
PTCD3-203ENST00000409783 CCHCR1Q8TD31 782 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 AP2M1Q96CW1 435 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 TBL1YQ9BQ87 522 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 RIOK2Q9BVS4 552 aaKnown RBP22.3■■□□□ 1.16
PTCD3-203ENST00000409783 LGR4Q9BXB1 951 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 TEX101Q9BY14 249 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 GPR63Q9BZJ6 419 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 TRABDQ9H4I3 376 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 PKD2L2Q9NZM6 624 aa22.3■■□□□ 1.16
PTCD3-203ENST00000409783 YKT6O15498 198 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 CSF2P04141 144 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 NME1P15531 152 aaKnown RBP22.29■■□□□ 1.16
PTCD3-203ENST00000409783 FDFT1P37268 417 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 TNNT3P45378 269 aaPredicted RBP22.29■■□□□ 1.16
PTCD3-203ENST00000409783 ID4P47928 161 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 PTK2BQ14289 1009 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 PUM1Q14671 1186 aaKnown RBP eCLIP22.29■■□□□ 1.16
PTCD3-203ENST00000409783 KCTD16Q68DU8 428 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 GATAD2AQ86YP4 633 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 CREG2Q8IUH2 290 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 CCDC89Q8N998 374 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 GPR26Q8NDV2 337 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 MAGOHBQ96A72 148 aaKnown RBP22.29■■□□□ 1.16
PTCD3-203ENST00000409783 WDR26Q9H7D7 661 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms