RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 PLA2G4BP0C869 781 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 HOXB8P17481 243 aaPredicted RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 EPHA8P29322 1005 aaPredicted RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 CD6P30203 668 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 NTSR1P30989 418 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 UBA7P41226 1012 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 GSTM5P46439 218 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 SCNN1GP51170 649 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 SLC12A3P55017 1021 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 PEX3P56589 373 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 RPP30P78346 268 aaKnown RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 THOC5Q13769 683 aaKnown RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 KCNC3Q14003 757 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 KCNJ12Q14500 433 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 PTPAQ15257 358 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 PTPN14Q15678 1187 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 ZRSR1Q15695 479 aaKnown RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 ST3GAL2Q16842 350 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 TMEM196Q5HYL7 178 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 ATF7IP2Q5U623 682 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 RBM23Q86U06 439 aaKnown RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 ADHFE1Q8IWW8 467 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 GPR65Q8IYL9 337 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 RNF168Q8IYW5 571 aaPredicted RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 VPS52Q8N1B4 723 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 FSTL5Q8N475 847 aaPredicted RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 MRPL43Q8N983 215 aaKnown RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 SYT2Q8N9I0 419 aaPredicted RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 VN1R2Q8NFZ6 395 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 CASP10Q92851 521 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 REXO5Q96IC2 774 aaKnown RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 LOXL4Q96JB6 756 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 FAR2Q96K12 515 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 APOL6Q9BWW8 343 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 CCSER1Q9C0I3 900 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 ZSCAN16Q9H4T2 348 aaPredicted RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 CCDC134Q9H6E4 229 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 SYNCQ9H7C4 482 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 PLEKHA2Q9HB19 425 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 MARCH5Q9NX47 278 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 SLC25A10Q9UBX3 287 aaPredicted RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 DNAJB4Q9UDY4 337 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 ODF2LQ9ULJ1 636 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 BARX2Q9UMQ3 279 aaPredicted RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 MTMR6Q9Y217 621 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 PRG3Q9Y2Y8 225 aaPredicted RBP6.41□□□□□ -1.38
LSM5-203ENST00000409782 MUC3AQ02505 3323 aa6.41□□□□□ -1.38
LSM5-203ENST00000409782 CCDC169A6NNP5 214 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 HIDE1A8MVS5 230 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 K7ERI5 159 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 TOR1BO14657 336 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 PRRG2O14669 202 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 PER2O15055 1255 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 NKX2-8O15522 239 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 STX6O43752 255 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 TBCAO75347 108 aaKnown RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 EDN1P05305 212 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 MCF2P10911 925 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 VDRP11473 427 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 PROZP22891 400 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 ABCD1P33897 745 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 KRT20P35900 424 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 PAFAH1B1P43034 410 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 OR1G1P47890 313 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 GLUD2P49448 558 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 ZNF131P52739 623 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 RPS7P62081 194 aaKnown RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 MC2RQ01718 297 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 MAMLD1Q13495 774 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 CCDC144NLQ6NUI1 221 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 ANKRD54Q6NXT1 300 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 FOXR2Q6PJQ5 311 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 PXKQ7Z7A4 578 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 GPBP1Q86WP2 473 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 CDR2LQ86X02 465 aaPredicted RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 CCDC105Q8IYK2 499 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 ADGRG5Q8IZF4 528 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.4□□□□□ -1.38
LSM5-203ENST00000409782 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.4□□□□□ -1.38
LSM5-203ENST00000409782 TMEM161BQ8NDZ6 487 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 RASSF8Q8NHQ8 419 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 OSCP1Q8WVF1 389 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 SUSD6Q92537 303 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 RAD54LQ92698 747 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 SH3KBP1Q96B97 665 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 MIEF2Q96C03 454 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 NECTIN4Q96NY8 510 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 DCLRE1CQ96SD1 692 aaKnown RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 NTPCRQ9BSD7 190 aaKnown RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 CENPOQ9BU64 300 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 CCDC94Q9BW85 323 aaPredicted RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 CDT1Q9H211 546 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 MUC13Q9H3R2 512 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 MRPL17Q9NRX2 175 aaKnown RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 HAUS2Q9NVX0 235 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 BEX4Q9NWD9 120 aaPredicted RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 LARSQ9P2J5 1176 aaKnown RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 SUFUQ9UMX1 484 aa6.4□□□□□ -1.38
LSM5-203ENST00000409782 SH3BP1Q9Y3L3 701 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms