RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 WWP1Q9H0M0 922 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 EML4Q9HC35 981 aaKnown RBP11.4□□□□□ -0.58
SNX13-202ENST00000409604 ANLNQ9NQW6 1124 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 KLQ9UEF7 1012 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 TK2O00142 265 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 LINC01565O15544 149 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 LATO43561 262 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 ZBTB14O43829 449 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 ZMPSTE24O75844 475 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 KAT7O95251 611 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 FGF19O95750 216 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 ABCB1P08183 1280 aaPredicted RBP11.4□□□□□ -0.58
SNX13-202ENST00000409604 MTA1Q13330 715 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 SERINC3Q13530 473 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 RPS27LQ71UM5 84 aaKnown RBP11.4□□□□□ -0.58
SNX13-202ENST00000409604 NLRP9Q7RTR0 991 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 MTDHQ86UE4 582 aaKnown RBP11.4□□□□□ -0.58
SNX13-202ENST00000409604 PIM3Q86V86 326 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 SPNS2Q8IVW8 549 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 SYT11Q9BT88 431 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 HGH1Q9BTY7 390 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 HERC2P3Q9BVR0 1158 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 RIOK2Q9BVS4 552 aaKnown RBP11.4□□□□□ -0.58
SNX13-202ENST00000409604 KLHL25Q9H0H3 589 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 RRP15Q9Y3B9 282 aaKnown RBP11.4□□□□□ -0.58
SNX13-202ENST00000409604 PSAT1Q9Y617 370 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
SNX13-202ENST00000409604 GABBR2O75899 941 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 RASSF9O75901 435 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 TPBGLP0DKB5 382 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 SGSHP51688 502 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 CCNG1P51959 295 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 DRG2P55039 364 aaKnown RBP11.4□□□□□ -0.59
SNX13-202ENST00000409604 WASHC5Q12768 1159 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 ITPRIPL2Q3MIP1 535 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 SLC9A4Q6AI14 798 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 TANGO2Q6ICL3 276 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 TXNDC5Q8NBS9 432 aaKnown RBP11.4□□□□□ -0.59
SNX13-202ENST00000409604 MCOLN3Q8TDD5 553 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 ACDQ96AP0 544 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 ZSWIM3Q96MP5 696 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 ACE2Q9BYF1 805 aaPredicted RBP11.4□□□□□ -0.59
SNX13-202ENST00000409604 APPL1Q9UKG1 709 aa11.4□□□□□ -0.59
SNX13-202ENST00000409604 PEX11AO75192 247 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 PRNPP04156 253 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 PSMC3P17980 439 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 SOAT1P35610 550 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 FSTL4Q6MZW2 842 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 SIDT2Q8NBJ9 832 aaKnown RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 GPR156Q8NFN8 814 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 RUBCNQ92622 972 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 THTPAQ9BU02 230 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 PCDHGB4Q9UN71 923 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 L3MBTL1Q9Y468 752 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 TCAF1Q9Y4C2 921 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 PIAS3Q9Y6X2 628 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 FAM237BA0A1B0GVD1 139 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 ISM1B1AKI9 464 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 PRMT5O14744 637 aaPredicted RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 TRIM13O60858 407 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 DCTN3O75935 186 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 MYO1DO94832 1006 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 KLF8O95600 359 aaPredicted RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 DLDP09622 509 aaKnown RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 VCLP18206 1134 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 RAP1GDS1P52306 607 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 SLC1A5Q15758 541 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 PREPLQ4J6C6 727 aaPredicted RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 GDPD4Q6W3E5 623 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 IQCKQ8N0W5 287 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 RIBC1Q8N443 379 aaPredicted RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 CLIP3Q96DZ5 547 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 B4GALT6Q9UBX8 382 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 GSAPA4D1B5 854 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 NPEPPSL1A6NEC2 478 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 B2RBV5 119 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 RB1P06400 928 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 SLC2A4P14672 509 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 AMD1P17707 334 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 MAPK8P45983 427 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 TTPAP49638 278 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 CHRNA6Q15825 494 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 TSTD2Q5T7W7 516 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 MSANTD2Q6P1R3 559 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 C22orf39Q6P5X5 142 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 TMEM220Q6QAJ8 160 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 AFTPHQ6ULP2 937 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 SPATA24Q86W54 205 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 TMPRSS6Q8IU80 811 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 BEND7Q8N7W2 519 aaPredicted RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 CNTD1Q8N815 330 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 LRRC39Q96DD0 335 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 CENPKQ9BS16 269 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 FAM124BQ9H5Z6 455 aaPredicted RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 ECT2Q9H8V3 914 aa11.39□□□□□ -0.59
SNX13-202ENST00000409604 CACYBPQ9HB71 228 aaKnown RBP11.39□□□□□ -0.59
SNX13-202ENST00000409604 ANKRD66B4E2M5 251 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 CLASP2O75122 1294 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms