RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 IRX4P78413 519 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 CBLBQ13191 982 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 POU6F1Q14863 301 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 TAF1AQ15573 450 aaPredicted RBP16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 DUOXA1Q1HG43 343 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 TMEM52BQ4KMG9 183 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 LRRC73Q5JTD7 316 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 PCID2Q5JVF3 399 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 CERCAMQ5T4B2 595 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 NEK5Q6P3R8 708 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 CASC4Q6P4E1 433 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 CRTC1Q6UUV9 634 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 NLRP9Q7RTR0 991 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 CCNJLQ8IV13 435 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 RAVER1Q8IY67 606 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 CXorf40AQ8TE69 158 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 C19orf43Q9BQ61 176 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 NAT9Q9BTE0 207 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 ZFYVE1Q9HBF4 777 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 NFU1Q9UMS0 254 aa16.52■□□□□ 0.24
TSPAN4-208ENST00000409531 CEP250Q9BV73 2442 aa16.52■□□□□ 0.23
TSPAN4-208ENST00000409531 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 MED19A0JLT2 244 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 PATE3B3GLJ2 98 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 E7ESA3 106 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 GDF9O60383 454 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 PCDH8O95206 1070 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 PRKCGP05129 697 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 LPOP22079 712 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 MAOBP27338 520 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 HMGCLP35914 325 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 PDIA2Q13087 525 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 MSLNQ13421 630 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 SEPT6Q14141 434 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 BBS9Q3SYG4 887 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 AASDHQ4L235 1098 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 TRIM61Q5EBN2 209 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 FNBP1LQ5T0N5 605 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 LRRC66Q68CR7 880 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 TCEAL6Q6IPX3 200 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 KIAA1161Q6NSJ0 714 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 SLC23A3Q6PIS1 610 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 RABEPKQ7Z6M1 372 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 MYRIPQ8NFW9 859 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 TCEAL3Q969E4 200 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 C6orf106Q9H6K1 298 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 MRM3Q9HC36 420 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 RXFP3Q9NSD7 469 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 KCTD5Q9NXV2 234 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 PKP3Q9Y446 797 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 SPO11Q9Y5K1 396 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 SCN8AQ9UQD0 1980 aa16.51■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3DA0A087WVF3 549 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3IA0A087WXS9 549 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3EA0A087X179 549 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3KA0A087X1G2 549 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3FA6NER0 549 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 MEI4A8MW99 385 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3LB9A6J9 549 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 SPINT1O43278 529 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3HP0C7X1 549 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 GNSP15586 552 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 ECHS1P30084 290 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TAS2R38P59533 333 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 DHX9Q08211 1270 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 RSPO4Q2I0M5 234 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 DENND2CQ68D51 928 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3GQ6DHY5 549 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3CQ6IPX1 549 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 LIPIQ6XZB0 460 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 LYSMD3Q7Z3D4 306 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TMC3Q7Z5M5 1100 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 CCDC25Q86WR0 208 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TBC1D3Q8IZP1 549 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 OR2T34Q8NGX1 318 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 PEX13Q92968 403 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 STAMBPL1Q96FJ0 436 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 SIGLEC10Q96LC7 697 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 NUSAP1Q9BXS6 441 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 PARD6BQ9BYG5 372 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 RAD18Q9NS91 495 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 SYBUQ9NX95 663 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 PKD2L2Q9NZM6 624 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 SUSD2Q9UGT4 822 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 RIMKLBQ9ULI2 386 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 SLC6A14Q9UN76 642 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 SOX13Q9UN79 622 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 ITM2BQ9Y287 266 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 TCAF1Q9Y4C2 921 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 MAD1L1Q9Y6D9 718 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 CEP192Q8TEP8 1941 aa16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 ATXN2Q99700 1313 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-208ENST00000409531 MROH6A6NGR9 719 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 FAM47DPA6NHR8 397 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 A8MX80 341 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 STX7O15400 261 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 CTIFO43310 598 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms