RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MYO19Q96H55 970 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 TCF12Q99081 682 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 A8MT66 165 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 FZD6O60353 706 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 SRP72O76094 671 aaKnown RBP20.68■□□□□ 0.9
USP39-203ENST00000409470 IPO13O94829 963 aaKnown RBP20.68■□□□□ 0.9
USP39-203ENST00000409470 RHOBTB1O94844 696 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 CLCN4P51793 760 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 PSRC1Q6PGN9 363 aaPredicted RBP20.68■□□□□ 0.9
USP39-203ENST00000409470 CAMK1DQ8IU85 385 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 RYBPQ8N488 228 aaPredicted RBP20.68■□□□□ 0.9
USP39-203ENST00000409470 TTC30BQ8N4P2 665 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 SHKBP1Q8TBC3 707 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 POPDC3Q9HBV1 291 aa20.68■□□□□ 0.9
USP39-203ENST00000409470 EVLQ9UI08 416 aaPredicted RBP20.68■□□□□ 0.9
USP39-203ENST00000409470 SLCO1B7G3V0H7 640 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 PFDN6O15212 129 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 RFPL2O75678 378 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 CTPS1P17812 591 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 KCNA5P22460 613 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 SUOXP51687 545 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 PLK1P53350 603 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 TIAL1Q01085 375 aaKnown RBP eCLIP20.67■□□□□ 0.9
USP39-203ENST00000409470 PLEKHG6Q3KR16 790 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 ZRANB3Q5FWF4 1079 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 SLC22A9Q8IVM8 553 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 CMTM8Q8IZV2 173 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 LPGAT1Q92604 370 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 TCEAL4Q96EI5 215 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 PHF21BQ96EK2 531 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 CNDP1Q96KN2 507 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 PPP1R36Q96LQ0 422 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 GPR63Q9BZJ6 419 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 TLR9Q9NR96 1032 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 VTI1BQ9UEU0 232 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 CCL26Q9Y258 94 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 PKP3Q9Y446 797 aa20.67■□□□□ 0.9
USP39-203ENST00000409470 A0A0U1RQS6 177 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 E9PBE3 544 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 F8W8V4 182 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 KLHL41O60662 606 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 PGLSO95336 258 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 SERPINB5P36952 375 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 CDKN1CP49918 316 aaPredicted RBP20.66■□□□□ 0.9
USP39-203ENST00000409470 MNAT1P51948 309 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 BCL2L1Q07817 233 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 ISCA2Q86U28 154 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 CD248Q9HCU0 757 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 TCF7L2Q9NQB0 619 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 ABCB8Q9NUT2 735 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 VPS9D1Q9Y2B5 631 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 ZNF711Q9Y462 761 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 GOLGA8QA0A0J9YX86 632 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.66■□□□□ 0.9
USP39-203ENST00000409470 GOLGA8OA6NCC3 632 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 GOLGA8NF8WBI6 632 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 NEMP1O14524 444 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 CHUKO15111 745 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 ZBTB14O43829 449 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 SNUPNO95149 360 aaKnown RBP20.66■□□□□ 0.9
USP39-203ENST00000409470 FGF19O95750 216 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 CD1DP15813 335 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 ZNF37AP17032 561 aaPredicted RBP20.66■□□□□ 0.9
USP39-203ENST00000409470 PTPN2P17706 415 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 MXRA7P84157 204 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 TEAD2Q15562 447 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 ARHGAP15Q53QZ3 475 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 PSAPL1Q6NUJ1 521 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 TMPRSS6Q8IU80 811 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 SPPL3Q8TCT6 385 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 OR52B2Q96RD2 323 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 NUF2Q9BZD4 464 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 TAS2R13Q9NYV9 303 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 GTSE1Q9NYZ3 720 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 FAM50BQ9Y247 325 aa20.66■□□□□ 0.9
USP39-203ENST00000409470 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.66■□□□□ 0.9
USP39-203ENST00000409470 GRID2O43424 1007 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 ALPIP09923 528 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 MAPK8P45983 427 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 TTPAP49638 278 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 METTL3Q86U44 580 aaKnown RBP20.65■□□□□ 0.9
USP39-203ENST00000409470 PIANPQ8IYJ0 282 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 PIH1D2Q8WWB5 315 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 PTERQ96BW5 349 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 TNKS2Q9H2K2 1166 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 WDR55Q9H6Y2 383 aaPredicted RBP20.65■□□□□ 0.9
USP39-203ENST00000409470 SYTL2Q9HCH5 934 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 MAGEE1Q9HCI5 957 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 DOCK6Q96HP0 2047 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 SMIM24O75264 130 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 IGSF6O95976 241 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 HNRNPLP14866 589 aaKnown RBP eCLIP20.65■□□□□ 0.9
USP39-203ENST00000409470 DDX6P26196 483 aaKnown RBP eCLIP20.65■□□□□ 0.95e-6■■■■■ 34.8
USP39-203ENST00000409470 GKP32189 559 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 PEX6Q13608 980 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 PTPRNQ16849 979 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 SH2D4BQ5SQS7 431 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 METTL21CQ5VZV1 264 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 ACAD11Q709F0 780 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 LYSMD3Q7Z3D4 306 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms