RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 C3orf38Q5JPI3 329 aa19.26■□□□□ 0.67
SMARCB1-204ENST00000407422 PLD5Q8N7P1 536 aa19.26■□□□□ 0.67
SMARCB1-204ENST00000407422 FAM46DQ8NEK8 389 aa19.26■□□□□ 0.67
SMARCB1-204ENST00000407422 GPR156Q8NFN8 814 aa19.26■□□□□ 0.67
SMARCB1-204ENST00000407422 HDAC11Q96DB2 347 aa19.26■□□□□ 0.67
SMARCB1-204ENST00000407422 TDRD1Q9BXT4 1180 aaKnown RBP19.26■□□□□ 0.67
SMARCB1-204ENST00000407422 PHPT1Q9NRX4 125 aaPredicted RBP19.26■□□□□ 0.67
SMARCB1-204ENST00000407422 A0A0J9YYE9 177 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 PMS2P1A4D2B8 440 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 KCNK1O00180 336 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 RRP8O43159 456 aaKnown RBP19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 MTA2O94776 668 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 PRLP01236 227 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 TRBC1P01850 177 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 ARHGAP25P42331 645 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 CDK3Q00526 305 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 PTSQ03393 145 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 CCDC173Q0VFZ6 552 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 TBX2Q13207 712 aaPredicted RBP19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 RAET1GQ6H3X3 334 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 LRRC69Q6ZNQ3 347 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 CCDC13Q8IYE1 715 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 CARS2Q9HA77 564 aaKnown RBP19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 KCTD5Q9NXV2 234 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 AMACRQ9UHK6 382 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 HYOU1Q9Y4L1 999 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 HEY1Q9Y5J3 304 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 ATMQ13315 3056 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 PDE2AO00408 941 aaPredicted RBP19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 NTN3O00634 580 aaPredicted RBP19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 NOBOXO60393 691 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 DXOO77932 396 aaKnown RBP19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 SOD1P00441 154 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 JCHAINP01591 159 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 CES1P23141 567 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 POLD2P49005 469 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 EPHB1P54762 984 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 SPIDRQ14159 915 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 OGFOD3Q6PK18 319 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 RHOT2Q8IXI1 618 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 SCAMP4Q969E2 229 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 FRMD8Q9BZ67 464 aaPredicted RBP19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 ABCG8Q9H221 673 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 ASCL3Q9NQ33 180 aa19.25■□□□□ 0.67
SMARCB1-204ENST00000407422 B4DGG1 531 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 AKR1B15C9JRZ8 316 aaPredicted RBP19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 CCL7P80098 99 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 DPTQ07507 201 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 PPIDQ08752 370 aaKnown RBP19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 ZBTB17Q13105 803 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 SLC9A4Q6AI14 798 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 B3GNT8Q7Z7M8 397 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 NRROSQ86YC3 692 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 CNGA4Q8IV77 575 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 LSMEM2Q8N112 164 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 NDUFAF2Q8N183 169 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 CNTD1Q8N815 330 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 WDR48Q8TAF3 677 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 NAF1Q96HR8 494 aaKnown RBP19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 HIC2Q96JB3 615 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 ZNF578Q96N58 590 aaPredicted RBP19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 DPEP2Q9H4A9 486 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 SPATS2LQ9NUQ6 558 aaKnown RBP19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 SUFUQ9UMX1 484 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 ST14Q9Y5Y6 855 aa19.24■□□□□ 0.67
SMARCB1-204ENST00000407422 ZFC3H1O60293 1989 aaKnown RBP19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 A0A1W2PQM1 296 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 RPLP0P05388 317 aaKnown RBP19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 MMP2P08253 660 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 KRT10P13645 584 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 TNNT1P13805 278 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 GPR1P46091 355 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 GNPDA1P46926 289 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 NPNTQ6UXI9 565 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 Q8N9G6 341 aaPredicted RBP19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 LPCAT1Q8NF37 534 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 RNF25Q96BH1 459 aaPredicted RBP19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 GRAMD1AQ96CP6 724 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 AP2M1Q96CW1 435 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 PRR11Q96HE9 360 aaPredicted RBP19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 ZNF830Q96NB3 372 aaPredicted RBP19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 AGAP2Q99490 1192 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 CEP41Q9BYV8 373 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 PCDH9Q9HC56 1237 aa19.23■□□□□ 0.67
SMARCB1-204ENST00000407422 CAPN8A6NHC0 703 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 ZNF487B1APH4 448 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 CLDN7O95471 211 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 KRT1P04264 644 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 TEAD1P28347 426 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 CD86P42081 329 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 STC1P52823 247 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 CERCAMQ5T4B2 595 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 FOXR1Q6PIV2 292 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 DOK6Q6PKX4 331 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 B4GALNT4Q76KP1 1039 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 SPACA3Q8IXA5 215 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 GPBAR1Q8TDU6 330 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 GFM1Q96RP9 751 aaKnown RBP19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 FOXP3Q9BZS1 431 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms