RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SUOXP51687 545 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 CLCN4P51793 760 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 KDSRQ06136 332 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 METTL3Q86U44 580 aaKnown RBP24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 SLC22A9Q8IVM8 553 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 FAM13CQ8NE31 585 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 SHKBP1Q8TBC3 707 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 POF1BQ8WVV4 589 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 MCUR1Q96AQ8 359 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 CYP4F12Q9HCS2 524 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 BPIFA1Q9NP55 256 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 A8MT66 165 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 SRP72O76094 671 aaKnown RBP24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 RHOBTB1O94844 696 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 CD70P32970 193 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 TIAL1Q01085 375 aaKnown RBP eCLIP24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 PTPRRQ15256 657 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 MAPK15Q8TD08 544 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 LPGAT1Q92604 370 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 GPR63Q9BZJ6 419 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 TLR9Q9NR96 1032 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 ABCB8Q9NUT2 735 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 EVLQ9UI08 416 aaPredicted RBP24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 PKP3Q9Y446 797 aa24.63■■□□□ 1.53
DNMT3A-206ENST00000406659 PGLSO95336 258 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 PTPN2P17706 415 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 DDX6P26196 483 aaKnown RBP eCLIP24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 MAPK8P45983 427 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 CSNK1DP48730 415 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 BCL2L1Q07817 233 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 SLC20A2Q08357 652 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 PLEKHG6Q3KR16 790 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 ARHGAP15Q53QZ3 475 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 ZRANB3Q5FWF4 1079 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 ISCA2Q86U28 154 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 TMPRSS6Q8IU80 811 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 CAMK1DQ8IU85 385 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 PAF1Q8N7H5 531 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 OR6K2Q8NGY2 324 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 SPPL3Q8TCT6 385 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 TCEAL4Q96EI5 215 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 MAGEE1Q9HCI5 957 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 MAN1C1Q9NR34 630 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 ZNF711Q9Y462 761 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 CHUKO15111 745 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 WFS1O76024 890 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 CTPS1P17812 591 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 TTPAP49638 278 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 METTL21CQ5VZV1 264 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 RTL10Q7L3V2 364 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 CMTM8Q8IZV2 173 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 RYBPQ8N488 228 aaPredicted RBP24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 MAGEC3Q8TD91 643 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 TCF7L2Q9NQB0 619 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 TAS2R13Q9NYV9 303 aa24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 FNDC3AQ9Y2H6 1198 aaKnown RBP24.62■■□□□ 1.53
DNMT3A-206ENST00000406659 GRID2O43424 1007 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 ZBTB14O43829 449 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 SMIM24O75264 130 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 RFPL2O75678 378 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 CD1DP15813 335 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 KCNA5P22460 613 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 CDKN1CP49918 316 aaPredicted RBP24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 PLK1P53350 603 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 TEAD2Q15562 447 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 ARHGAP24Q8N264 748 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 PHOSPHO2Q8TCD6 241 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 PHF21BQ96EK2 531 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 EML4Q9HC35 981 aaKnown RBP24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 SYTL2Q9HCH5 934 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 CCL26Q9Y258 94 aa24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 MTF2Q9Y483 593 aaPredicted RBP24.61■■□□□ 1.53
DNMT3A-206ENST00000406659 IGSF6O95976 241 aa24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 ZNF37AP17032 561 aaPredicted RBP24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 MNAT1P51948 309 aa24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 EPHA5P54756 1037 aa24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 RPL26P61254 145 aaKnown RBP24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 MXRA7P84157 204 aa24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 AARS2Q5JTZ9 985 aaKnown RBP24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 ACAD11Q709F0 780 aa24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 SUGP1Q8IWZ8 645 aaKnown RBP24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 PIH1D2Q8WWB5 315 aa24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 HERVK_113Q902F9 699 aa24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 FAM136AQ96C01 138 aa24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 INTS6Q9UL03 887 aaKnown RBP24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 RPL26L1Q9UNX3 145 aaKnown RBP24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 MTCL1Q9Y4B5 1905 aaKnown RBP24.6■■□□□ 1.53
DNMT3A-206ENST00000406659 E9PBE3 544 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 H7C0S8 307 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 KLHL41O60662 606 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 PEX6Q13608 980 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 PTPRNQ16849 979 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 WASHC2DQ5SRD0 308 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 PSAPL1Q6NUJ1 521 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 TAS2R42Q7RTR8 314 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 PIANPQ8IYJ0 282 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 PTERQ96BW5 349 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 OR52B2Q96RD2 323 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 NUF2Q9BZD4 464 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms