RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ASB1Q9Y576 335 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 COL4A6Q14031 1691 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 TRIM64A6NGJ6 449 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 C9JVG2 144 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 UBXN8O00124 270 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 OAZ2O95190 189 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SNRPB2P08579 225 aaKnown RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 FGF4P08620 206 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 PAMP19021 973 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 PSMA3P25788 255 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SLC5A2P31639 672 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 ACADVLP49748 655 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 CLCN2P51788 898 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 CDH13P55290 713 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SERINC3Q13530 473 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 RSPO2Q6UXX9 243 aaPredicted RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 AMIGO2Q86SJ2 522 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 HERC6Q8IVU3 1022 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SERPINB11Q96P15 392 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 ADAM2Q99965 735 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 ARHGAP39Q9C0H5 1083 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 MUC3BQ9H195 1237 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SPAG4Q9NPE6 437 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 NOD1Q9Y239 953 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SCN5AQ14524 2016 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 CCDC162PA2VCL2 907 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 H0YJX3 145 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 GPR182O15218 404 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 NRP2O60462 931 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 BMP1P13497 986 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SLC7A1P30825 629 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SLC26A3P40879 764 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 RPL5P46777 297 aaKnown RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 RGRP47804 291 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 GNASQ5JWF2 1037 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 CYP2R1Q6VVX0 501 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 LRRC49Q8IUZ0 686 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 COLGALT2Q8IYK4 626 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 NMD3Q96D46 503 aaKnown RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 MRPL1Q9BYD6 325 aaKnown RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 ZYG11BQ9C0D3 744 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 CMTM6Q9NX76 183 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 ADA2Q9NZK5 511 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 AP4S1Q9Y587 144 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 DENND4CQ5VZ89 1909 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 TRIM64CA6NLI5 447 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 CELF2O95319 508 aaKnown RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 TSPAN12O95859 305 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 UGT1A6P19224 532 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 HOXD9P28356 352 aaPredicted RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 PRDX3P30048 256 aaKnown RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 OXTRP30559 389 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 ALDH3B2P48448 385 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 CACNB2Q08289 660 aaPredicted RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 FAM26DQ5JW98 314 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SPATA2LQ8IUW3 424 aaPredicted RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 TMIGD2Q96BF3 282 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 TSNARE1Q96NA8 513 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 PPP1R2P1Q96PQ5 205 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 PRPF18Q99633 342 aaKnown RBP9.84□□□□□ -0.83
MSH2-202ENST00000406134 ARMC1Q9NVT9 282 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SPO11Q9Y5K1 396 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 SQORQ9Y6N5 450 aa9.84□□□□□ -0.83
MSH2-202ENST00000406134 TCRBV5S2A0A599 114 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 H3BNC9 293 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 PIP5K1BO14986 540 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 ACOX3O15254 700 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 THPOP40225 353 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 RGS2P41220 211 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 RENBPP51606 427 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 SLC7A2P52569 658 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 ZNF140P52738 457 aaPredicted RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 YWHAHQ04917 246 aaPredicted RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 GALNT3Q14435 633 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 POLD3Q15054 466 aaPredicted RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 IYDQ6PHW0 289 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 ANKFN1Q8N957 763 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 TET1Q8NFU7 2136 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 FAR2Q96K12 515 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 TRIM62Q9BVG3 475 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.83□□□□□ -0.84
MSH2-202ENST00000406134 POLG2Q9UHN1 485 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 PADI4Q9UM07 663 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 PCDHA9Q9Y5H5 950 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 MRASO14807 208 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 HTRA2O43464 458 aaPredicted RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 ASLP04424 464 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 RBP1P09455 135 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 GNAO1P09471 354 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 NELFEP18615 380 aaKnown RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 SLC6A4P31645 630 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 CDKN1CP49918 316 aaPredicted RBP9.83□□□□□ -0.84
MSH2-202ENST00000406134 ECT2LQ008S8 904 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 PYCR3Q53H96 274 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 MARC1Q5VT66 337 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 RAP1GAP2Q684P5 730 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 IL31Q6EBC2 164 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 BORAQ6PGQ7 559 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 METTL23Q86XA0 190 aa9.83□□□□□ -0.84
MSH2-202ENST00000406134 OR2T11Q8NH01 316 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms